Gene Nham_0527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0527 
Symbol 
ID4029976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp582789 
End bp583328 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content63% 
IMG OID637969057 
Productdinucleoside polyphosphate hydrolase 
Protein accessionYP_575877 
Protein GI92116148 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.741334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCAGAGC GGGGAGGCGC GAAAGGCATT GACGCAATGG CGCGCTACGA CGATCTACCC 
TACCGCACTT GCGTCGGCAT GATGCTGATC AACGAGAGGG GACTCGTCCT TATCGGTCGC
CGCGCCGGCG GCATCGAGCA CGTCGACGAC GAGTATGTCT GGCAGATGCC GCAAGGCGGC
GTCGATCCCG GCGAGGACAC ATGGCTCGCG GCGAAACGCG AACTCTATGA GGAGACCAGC
GTTCGCTCGG TCGAGAAGCT CGCCGAGGTA TCCGACTGGC TGATCTATGA TATTCCGCGC
ACCGTGGCCG GACGGGCCTG GAAGGGCCGC TATCGCGGAC AGCGCCAGAA GTGGTACGCG
ATGCGCTTCA CCGGCAAGGA CAACGAGATC GACGTCGTCA ATCCGGGCGG CGGTCACAAG
GCGGAATTCA TCGGATGGCG CTGGGAGCCG ATGCAGAACC TGCCCCGGTT AATCGTGCCT
TTCAAGCGCC CGGTCTATGA GCGCGTGGTC AAGGAATTCG CGAGCCTCTC GGGCGGTTAG
 
Protein sequence
MSERGGAKGI DAMARYDDLP YRTCVGMMLI NERGLVLIGR RAGGIEHVDD EYVWQMPQGG 
VDPGEDTWLA AKRELYEETS VRSVEKLAEV SDWLIYDIPR TVAGRAWKGR YRGQRQKWYA
MRFTGKDNEI DVVNPGGGHK AEFIGWRWEP MQNLPRLIVP FKRPVYERVV KEFASLSGG