Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_0523 |
Symbol | |
ID | 4029972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 578129 |
End bp | 578611 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637969053 |
Product | rRNA large subunit methyltransferase |
Protein accession | YP_575873 |
Protein GI | 92116144 |
COG category | [S] Function unknown |
COG ID | [COG1576] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.238061 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGACTCG TCGTCATTGC CATTGGCCGT CTCAAGCAGG GCCCGGAGCG GGAGCTCGCC GACCGCTATC GCGGACGCTT TGACGATATC GGTCGCAAGC TCGGCTTTCG TGGCTTCGAC GTTCATGAAA TCCCGGAAAG CCGCGCCCGC GATGCCAAGC AACGCATTCG CGAAGAGGCT GCGGCAATTC TTGCTTTGGC TCCTGAGGGA GCGGTCCTGG TGGCGCTGGA CGAAAAGGGC AAAAACATCG ACAGCGCCGC GTTCGCGGAT CATCTTGGTC GCTGGCGGGA TGAGTCGGTG ACGAGCACCG TTTTCGCCGT GGGCGGCGCG GACGGACTTT CGCCCGAATT GCGGCGCAAG GCTAGATTAA GCGTCGCGTT CGGCGCGGCC ACCTGGCCGC ATCAGATCGT GCGCGTGATG TTGCTGGAGC AGATTTACCG GGCCGCGACC ATCCTGGCCG GCCATCCTTA TCACCGTGGT TAG
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Protein sequence | MRLVVIAIGR LKQGPERELA DRYRGRFDDI GRKLGFRGFD VHEIPESRAR DAKQRIREEA AAILALAPEG AVLVALDEKG KNIDSAAFAD HLGRWRDESV TSTVFAVGGA DGLSPELRRK ARLSVAFGAA TWPHQIVRVM LLEQIYRAAT ILAGHPYHRG
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