Gene Nham_0496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0496 
Symbol 
ID4029924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp547407 
End bp548063 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content62% 
IMG OID637969024 
Productheat shock protein DnaJ-like 
Protein accessionYP_575846 
Protein GI92116117 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCATGC CGATCGATGC ATCGAAATTC TTCGACAGTA TCCGCATCAA GCCCACCCGG 
GCCGGTGCGA AGCAGCCGCG CGTGCGCGAG GAAGCGGTCG GCTGCGAGTG GCCGGACTGT
CAGAACAAGG GATCGCACCG CGCGCCGAAA GGCCGTGGCA ACGAGCGCGA GTATTTCCAC
TTTTGCCTGA ACCATGTCCG CGCCTACAAC CAGTCCTACA ATTTCTTTCA GGGCATGAAC
GCGGACGCGG TCGCGCGCTA TCAGAAGGAT GCTCTGACCG GTCACCGCCC GACCTGGAAA
ATGGGCGCCA ACGGCACCAA GGGCAAAGGC AAGACCGGCG ACATCGATCT CGAGGGCATG
GCCGATCCCT TCAGCGTGTT CGGCGAACTC AATGGCCGTG GAAAGTGGCG TCCCGGTCCG
GGGTCGGGGG CCGAAGCCAA ACCCGAGACG CGCAAGATCT TCAACGCCGA GCGTAAAGCG
CTGCAGGTGA TGGGACTCGG CGCCGACGCC ACGCTCGAAA CCGTCAAGGC GAAATACAAG
TTGTTGGTGA AGCAGCATCA CCCCGATGCC AACGGCGGCG ACCGCTCGAC GGAGGATCGC
CTGATCGAGA TCATCAAGGC GTATAATTAC CTGAAGACGG TGGTGCGCGG CGCCTGA
 
Protein sequence
MVMPIDASKF FDSIRIKPTR AGAKQPRVRE EAVGCEWPDC QNKGSHRAPK GRGNEREYFH 
FCLNHVRAYN QSYNFFQGMN ADAVARYQKD ALTGHRPTWK MGANGTKGKG KTGDIDLEGM
ADPFSVFGEL NGRGKWRPGP GSGAEAKPET RKIFNAERKA LQVMGLGADA TLETVKAKYK
LLVKQHHPDA NGGDRSTEDR LIEIIKAYNY LKTVVRGA