Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_0470 |
Symbol | prfA |
ID | 4030050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 519175 |
End bp | 520260 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637968998 |
Product | peptide chain release factor 1 |
Protein accession | YP_575820 |
Protein GI | 92116091 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0216] Protein chain release factor A |
TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.807242 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCTCAC TGCCCGAAGC CAAACTCGAT ATCCTGCTCG CCCGTCACGC CGCGCTCGAA AACGAGCTGC TGAGCCAGAT CAGTGCCGAA CGATACGTGC AGATGACGCG CGAGCTGTCA GAGCTCAATC CCGTCGTGGA AGCCGTGAAG AACTGGCGCG CGGTCAAGAC CGAGATCGCC GGCATCGACG CGATGATCGC CGATCCGGCC ACGGACGCCG AGATGCGGGC GATGGCGGAA GCCGAGCGTC CGGCGCTGGG GGCGCGCGGC GACGAGCTCG CGCAGAAGAT CCGCGTCGCG TTGCTGCCGA AGGATGCCAT GGACGAGCGC AACGTGATGC TCGAGATCCG CGCCGGCACC GGAGGCGACG AAGCCTCGCT GTTCGCCGGC GATCTGTTCC GGATGTACGA GCGCTTCGCA GGCTTGCAGG GCTGGAAGGT GGAAGCGATA TCCGCGAGCG AAGGCACCAT GGGCGGCTAC AAGGAAATCG TCGCCGAGGT GCGGGGCCGG GGCGCCTACG CCAAGCTGAA GTTCGAATCC GGCGTGCACC GGGTCCAGCG CGTGCCCGAT ACCGAGACGC AGGGACGCGT CCACACTTCG GCGGCGACAG TGGCGGTGCT GCCGGAAGCC GAGGAGGTCG ACGTCGACAT CAAGACCGAT GATCTGCGCA TCGAAACCAT GCGCGCGCAG GGCGCGGGCG GCCAGCACGT CAACAAGACG GAATCGGCGA TCCGCATCAC CCACATCCCG ACCGGCATCG TCGTCATGAT GCAGGACAGC CGTTCACAGC ACAAGAACCG CGCCTCCGCG ATGAACATCC TGCGCTCGCG CATCTACGAC GCCGAGCGCC AGCGCATCAA TGCCGCGCGC TCGGCCGACC GCAAGGATCA GGTCGGATCG GGCGACCGAT CCGAGCGAAT CCGCACCTAC AATTTTCCGC AAGGCCGTGT CACCGATCAC CGCATCAACC TGACGCTCTA CAAGCTGCCG CAAGTCATCG CCGGCGACGC GCTGCACGAA CTGATCGACG CGCTGACCAC CGAACATCAG GCGGCGCAGC TCGCAACCGA AGGCGGCGGC GCGTGA
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Protein sequence | MSSLPEAKLD ILLARHAALE NELLSQISAE RYVQMTRELS ELNPVVEAVK NWRAVKTEIA GIDAMIADPA TDAEMRAMAE AERPALGARG DELAQKIRVA LLPKDAMDER NVMLEIRAGT GGDEASLFAG DLFRMYERFA GLQGWKVEAI SASEGTMGGY KEIVAEVRGR GAYAKLKFES GVHRVQRVPD TETQGRVHTS AATVAVLPEA EEVDVDIKTD DLRIETMRAQ GAGGQHVNKT ESAIRITHIP TGIVVMMQDS RSQHKNRASA MNILRSRIYD AERQRINAAR SADRKDQVGS GDRSERIRTY NFPQGRVTDH RINLTLYKLP QVIAGDALHE LIDALTTEHQ AAQLATEGGG A
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