| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0423 |
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| Symbol | |
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| ID | 4030117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 465989 |
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| End bp | 468067 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637968952 |
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| Product | carbohydrate-selective porin OprB |
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| Protein accession | YP_575774 |
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| Protein GI | 92116045 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGAGCGA ACGGTGCGAT AGATGACCAA TACGGGAACT TGCCAGTCCA AGCGGACGGT
CCGATGAGTG CCATCCGGCC ATTCCGGCTG CGGCGCGGAA GGCACGTTGT GCTGGCCGGC
GTGGCCTTGA GCGCGCTTGC GCTGGGCGGC TCGGCTGTCG CCGCCGATGT CGGCGCATCC
CTCCTGCCGA CCAAAGCCAT GCCCCGCCCG GTGATCGACT GGACCGGCCT CTATTTTGGC
GCCCATGCCG GGTTCGGCGG CGGCCGATCC ACAGCAACGC TCGTCGATCC TGCGTCGACC
ACCGGCCGCA ACGATTACGG CGGCATTATC AGTGGCGTTC AGGCCGGCTA CAACATCCAG
CTTCCCTCGG GACTGCTGCT CGGCCTCGAA GCCGACATCT CGTTTCCGAA CTACATCGAG
TCCAATTCGG ACGTCTCAAA GCTCGCGACC GCACGCTCCG CCGTCACGCA GCAGTGGGAT
TTCATCGGAT CGGCGCGCGG CCGGATCGGC TACGCCACGG GTCCATGGCT GACCTATGCC
AGCGGCGGTC TCGCCTTTGC CGGCGAGCGC TACCTGAACG ATCTGCCGTC GGGCGATCAG
GAGAAGGCGC TGGACATGCG CCTTGGCTGG GCAGCCGGCG CGGGGCTTGA ATACGCCTTC
ACGCCAAGTT GGAGCGCGCG GCTGGAATAT CTTTACTACC GGTTCGACAA GACGAACGTT
CAGTTTCCAT CGGCCGCGCA ATACGCCGCG ACGATGGACA TGCATTCGAT TCGCGTCGGC
CTCAACCGCA AGCTCGGCGG GTCGGCCGGC ATAGCCGATC TCTCGCTGAA GTCCCTGACC
GATCCTGAAT CCGATCGCTG GGAGATTCAT GGCCAGACAA CCTATCTCGG CCAGGGCTAC
CCGGCGTTCC GCGCGCCCTA CAGCGGCGCC AACAGCCTGA CGCCGGGCGC GCAGTATCAG
GCAACCTGGA GCAACAGCCT GTTCTTGAAC GCGCGGCTCT GGGACGGCGG CGAAGTCTAC
TACAACCCCG AACTGCTTCA GGGCTTCGGC CTCAGCGACA CCGTCGGAGT CGCGGGCTTC
CCAAGCGGCG AGGCGCAAAA GTCCAACTTC CCCTATCCGC ACTACAACAC CTCGCGGCTG
TTCGTGCGCC AGACCTTCGG CTTCGGCGGC GAGCAGGAAG AACTGGCGAG CGGGCCGGCG
CAACTCGCGG GCAAAGCCGA CATCTCGCGG CTGACGATCC AGGCCGGCAA GTTCGCTGTC
ACCGACGTGT TCGACGGCAA CGCCTATGCC AAGGATACCC GCTCGGACTT CATGAACTGG
TCGCTGTGGG CGCCCGGCGC CTTCGACTAT TCCGCCGACA GGCTGGGACT GAGTTACGGC
GTCACCGCCG AGCTCAACCA GAAACAATGG GCGCTGCGTG GCGGCTATTT TCTGATGGAC
GCGGAATCGA ACGCGAACAG CTTCGACACC CGCCTGTTCC GGCGCGGCGA GTATGTGCTG
GAACTGGAAA CGCGCTATTC GCTGCTGGGC CAGCCCGGCA AGCTCCGCAC CATCGGCTGG
CTCAACAGCG CCTATATGGG CAGTTATCGC GACACGCTGA ACAATCCCGC TTTCAATCTC
GACATCGCGC AGACCCGCAC CGGCCGCATC AAGTACGGTT ACGTCGTCAA TATCGAGCAG
GCGGTCACCG ACGACATCGG ACTGTTCGGC CGCTGGAGCT GGAACGACGG CAAGACCGAG
ATCATGGCGT TCACCGATAT CGATGCCAGC CTCGCGCTCG GGACCTCGAT CAAGGGCACG
CGCTGGAGCC GGCCGGGCGA CGTGATCGGC ATCGGCGGCG CGATCAACGC GCTGTCACGG
GATCATCGCG ACTTCATCGC CGCCGGCGGC CTCGGCGTTC TCGTCGGCGA TGGCCAGCTC
AACTACCGCC ACGAGCGCGT GCTGGAAGCT TACTATGCCT ATGCGCTCAA CAAGCAGTTC
ACGCTGACTG CGGACTATCA GTTCATTGCC AACCCCGCCT ACAACGCCGA CCGCGGCCCG
GTGCACGTGT TTTCCGGACG GCTGCACGGG GAGTTTTGA
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| Protein sequence | MRANGAIDDQ YGNLPVQADG PMSAIRPFRL RRGRHVVLAG VALSALALGG SAVAADVGAS
LLPTKAMPRP VIDWTGLYFG AHAGFGGGRS TATLVDPAST TGRNDYGGII SGVQAGYNIQ
LPSGLLLGLE ADISFPNYIE SNSDVSKLAT ARSAVTQQWD FIGSARGRIG YATGPWLTYA
SGGLAFAGER YLNDLPSGDQ EKALDMRLGW AAGAGLEYAF TPSWSARLEY LYYRFDKTNV
QFPSAAQYAA TMDMHSIRVG LNRKLGGSAG IADLSLKSLT DPESDRWEIH GQTTYLGQGY
PAFRAPYSGA NSLTPGAQYQ ATWSNSLFLN ARLWDGGEVY YNPELLQGFG LSDTVGVAGF
PSGEAQKSNF PYPHYNTSRL FVRQTFGFGG EQEELASGPA QLAGKADISR LTIQAGKFAV
TDVFDGNAYA KDTRSDFMNW SLWAPGAFDY SADRLGLSYG VTAELNQKQW ALRGGYFLMD
AESNANSFDT RLFRRGEYVL ELETRYSLLG QPGKLRTIGW LNSAYMGSYR DTLNNPAFNL
DIAQTRTGRI KYGYVVNIEQ AVTDDIGLFG RWSWNDGKTE IMAFTDIDAS LALGTSIKGT
RWSRPGDVIG IGGAINALSR DHRDFIAAGG LGVLVGDGQL NYRHERVLEA YYAYALNKQF
TLTADYQFIA NPAYNADRGP VHVFSGRLHG EF
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