Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_0397 |
Symbol | |
ID | 4030206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 438471 |
End bp | 439085 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637968926 |
Product | TadE-like |
Protein accession | YP_575748 |
Protein GI | 92116019 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4961] Flp pilus assembly protein TadG |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.561765 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAGTA TCTGGTCATG CATCAGGGTT TCGGCGGCAG CGATGCGGCG TGATTCGCGG GGCGTTGCCG CGATCGAATT TGCGATGATC GTGCCGCTGA TGCTGGTGAT GCTGTTCGGG ACCATCGATG TGTCGTCGGG CGTGGCGGTC AAGCGCAAGG TCACGCTGGT CGCGAGGACG CTGTCCGACC TGACGTCGCA GTCCAAGGTG GTGGGCGACG CGGACATCAC GAACTTCTTG GCTGCCAGCT ATGGCATCAT GTGGCCCTAT CCGTCGGCGC CGGTCCAGGC CACCATTTCG GAACTCTACA TCGATCCGGC GACGTCTGTG GCGCGGGTGC AGTGGAGCCA GGGATCGTCG CCGCGAGGCG TGGGCTCGAC AGTCAGCATT TCGTCGGACC TCATCGGCAA GGATTCGTCG GACAAGACGC TTCCCGGTCA GTACCTGATC TACAGCGAGG TCAGCTATCT CTACCAGCCG ATCGTCGGCT ACGTGATGGC GAAAGCCGGC GTGACGCTGA GCGACACCGC CTATACGCGG CCGCGTCAGT CCATGTGCGT CACCTATCCC ACGCCGCCTG CCGGCACCCC TTTTCCTCCT TGCCCGACGA ATTGA
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Protein sequence | MSSIWSCIRV SAAAMRRDSR GVAAIEFAMI VPLMLVMLFG TIDVSSGVAV KRKVTLVART LSDLTSQSKV VGDADITNFL AASYGIMWPY PSAPVQATIS ELYIDPATSV ARVQWSQGSS PRGVGSTVSI SSDLIGKDSS DKTLPGQYLI YSEVSYLYQP IVGYVMAKAG VTLSDTAYTR PRQSMCVTYP TPPAGTPFPP CPTN
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