Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_0257 |
Symbol | |
ID | 4031005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 287696 |
End bp | 288682 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637968793 |
Product | protoheme IX farnesyltransferase |
Protein accession | YP_575617 |
Protein GI | 92115888 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.430018 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGCGCG CTCGCCGCGC CGCGTACCTC AACAAAGTGA GTTGTGTCTT GCCGGTAGTC GATCAAAACG CCATTGAGCT GCCGCCCCGG ATATCGGAGG CGAGCGTCGC CGATTACTTC GCGCTGCTGA AGCCACGGGT GATGTCGCTC GTGATCTTCA CCGCGCTGGT CGGACTGATG ATTGCGCCGG GCCATGTACA CCCGGTGCTG GGCTTCACCG CGATCCTGTG CATCGCGGTC GGCGCCGGTG CCTCCGGCGC GCTGAACATG GCGCTCGAAG GCGATATCGA CGTGCTGATG TCGCGCACGG CCAACCGGCC GATCCCGCGC GGCCGCATCA CCCGCGGCGA GGCGATGGGG TTCGGCCTCA CGCTGTCGTT CTTCTCGGTG ATGACGCTCG GCGCCCTGGT CAACTGGTAC GCCGGGGGAT TGCTGGCCTT TACGATCTTT TTCTACGTGG TGATCTACAC CATGGGGCTG AAGCGCCGGA CCGCGCAGAA CATCGTGATC GGCGGCGCCG CCGGCGCACT GCCGCCGGTG GTGGCGTGGG CGGCGGCGAC GGGGTCGCTG TCGGTCGAGC CGCTGCTGCT GTTTTTGATC ATCTTCTTCT GGACGCCGCC GCATTTCTGG GCGCTGGCGC TGTTCCGCTC CGACGATTAT GCGCGCGCCG GCGTGCCGAT GCTGCCGGTG GTCGCCGGCC CCGATGCGAC GCGGCTGCAG ATCCTGCTCT ATACCATCGT GCTGGTGGCG ATCGCCGCCG CGCCCTGGCC GCTCGGCTAT TTCGACTGGG TTTATGGCGT CACCTCGCTG GTTCTCGGCG CCGGCATGCT GGTGCTCGCG ATCAATGTCT ATCGCCATCG CACCGGCAGC ACGGCGCTGC GCGCCACGCG ACGCCTGTTC GCATTTTCGA TCCTCTATCT GTTCGCGCTG TTTGCCGTTC TGCTGCTCGA TGTGCTTGCG AAGGCCGTCG CGCCGTTGAT CTGGTAA
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Protein sequence | MRRARRAAYL NKVSCVLPVV DQNAIELPPR ISEASVADYF ALLKPRVMSL VIFTALVGLM IAPGHVHPVL GFTAILCIAV GAGASGALNM ALEGDIDVLM SRTANRPIPR GRITRGEAMG FGLTLSFFSV MTLGALVNWY AGGLLAFTIF FYVVIYTMGL KRRTAQNIVI GGAAGALPPV VAWAAATGSL SVEPLLLFLI IFFWTPPHFW ALALFRSDDY ARAGVPMLPV VAGPDATRLQ ILLYTIVLVA IAAAPWPLGY FDWVYGVTSL VLGAGMLVLA INVYRHRTGS TALRATRRLF AFSILYLFAL FAVLLLDVLA KAVAPLIW
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