Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_0219 |
Symbol | |
ID | 4030813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 239411 |
End bp | 240679 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637968755 |
Product | O-succinylhomoserine sulfhydrylase |
Protein accession | YP_575579 |
Protein GI | 92115850 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | [TIGR01325] O-succinylhomoserine sulfhydrylase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCCCGG CCTGTGGATT TTTCCAGGCC GGTTTTTTTG TGACCGTTTT TCAAGGCGGT CGCGCAGGAG GTCACATGTC GCAGTCTTCG CCCACCGCCC AATATCGTAC TGAAACCCGG CTGGTTCATT CCGGAACGAT GCGCTCGCAG TTCGCCGAGA CCTCGGAAGC ACTGTTCCTG ACCCAGGGCT ATATCTACGA CACCGCCGAA CAGTGCGAGG CGCGGTTCAA GGGCGAGGAC CCGGGTTTCA TCTACTCGCG CTACTCCAAC CCGACCGTCG CCATGTTCGA GCAGCGCATG GCCGAACTGG AAGGTGCGGA AGCGGCGCGC GCCACCGCGA CAGGCATGGC GGCGGTGACG ACCGCGATGC TCGCGCCCTT GAGGGCCGGC GATCACGTCG TCGCGGCCAA GGCCTTGTTC GGCTCCTGCC GCTATGTGGT AGAGGATCTG CTGCCGCGCT ACGGTATCGA GTCCACGCTG GTCGACGGCC TCGATCTCGA GCAGTGGCGC AAGGCGATGA GGCCGAACAC GAAAAGCTGC TTCATCGAAA GCCCGACCAA CCCGACGCTC GACGTGCTCG ACATCGGCGG TATCGCCGAG ATCGCGCATC AGGCCGGCGC GCGGCTGATC GTCGACAATG TGTTCGCGAC GCCGATCTGG CAAAGTCCGC TGGCGCTCGG CGCTGACATC GTGGTGTATT CGGCGACCAA GCACATCGAC GGTCAGGGAC GAACGCTCGG CGGCGTCATC CTGTGCTCGA ACGCCTTCGT CCAGGAGCAC CTGCAAACCT TTATACGCCA GACCGGGCCG TCGATCTCGC CGTTCAACGC CTGGGTTCTC CTGAAAGGGT TGGAGACGCT CGGCGTCCGC GTGCGCCAGC AGACCGAGAG CGCCGCCGCG ATCGCGGATG CGCTGGCGTC GCATCCGAAA GTGTCCCGCC TCATCTATCC CGGCCGGCCG GACCATCCGC AGGCGGCGCT CGTGAAAAAG CAGATGCGCG CCGGCTCGAC GCTGATCGGA TTCGAGGTCA AGGGCGGCAA GGCGGGCGCT TTCCGCTGTC TCAACGCGCT CAAGCTCGCG CGCATCTCGA ACAACCTCGG CGACGCCAAG AGCCTCGTGA CCCACCCGGC GACCACCACC CACCAGCGGC TCGCCCCGGA GGTCCGCGTC GGCCTGGGCA TCGGCGAAGG CTTCATCCGC TATTCGGCCG GCCTCGAACA CAAGGACGAC CTGATCGAGG ATCTCGTCGC CGCGCTGGAG ACGGTGTGA
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Protein sequence | MIPACGFFQA GFFVTVFQGG RAGGHMSQSS PTAQYRTETR LVHSGTMRSQ FAETSEALFL TQGYIYDTAE QCEARFKGED PGFIYSRYSN PTVAMFEQRM AELEGAEAAR ATATGMAAVT TAMLAPLRAG DHVVAAKALF GSCRYVVEDL LPRYGIESTL VDGLDLEQWR KAMRPNTKSC FIESPTNPTL DVLDIGGIAE IAHQAGARLI VDNVFATPIW QSPLALGADI VVYSATKHID GQGRTLGGVI LCSNAFVQEH LQTFIRQTGP SISPFNAWVL LKGLETLGVR VRQQTESAAA IADALASHPK VSRLIYPGRP DHPQAALVKK QMRAGSTLIG FEVKGGKAGA FRCLNALKLA RISNNLGDAK SLVTHPATTT HQRLAPEVRV GLGIGEGFIR YSAGLEHKDD LIEDLVAALE TV
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