Gene Nham_0190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0190 
Symbol 
ID4030650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp210726 
End bp211865 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content61% 
IMG OID637968726 
Producthypothetical protein 
Protein accessionYP_575551 
Protein GI92115822 
COG category[V] Defense mechanisms 
COG ID[COG2348] Uncharacterized protein involved in methicillin resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTCAAC AAGCCAATGT TCCTCCCCTT GGCGTGGCCG CGCCGATCGA TTGTCCAACG 
CCGGCGGACC GTTATAGCGT CGAGATCGAC AGCGTGGCGA GCGATGCATG GGATGTGATC
GCCAGCGGTT TCGCTGACAT CCATCCCGAG CAGACGGCTT GCTACGCGTC CAATCACTGG
AAGGGGCACG ACAGCCATCT TCTTCTTCGA CACAACGGCG AGCCTGTCGC CGGCGCGCGG
GTCGCTATCG TAGGCCTGCC CCTGATTGGC CGGGGATTGG CCTTCCTGCG CTTTGGTCCA
TTCTGGCGGA AGCAAAAAGC GGAGGCGGAC CCGGAAATCT ACCGCACCAT GATCGCGGCG
CTGGTCGAGG AATATTGCGT GACTCGCGGT CATTGCCTGA CCACCCTGTC CCGGCCGCAC
CCGCATTACC ATGCACTGGA ATGCGGCTTG CTGCGCGATC TCGGCTTTGT GCAGCGGCGC
GCGTTCAGCG ACTGTGAGCG CTACGTGGTC AATACGGCGC TCGATGCCGA AACGCAACGC
CGGAGCCTCG CGCAGAAGTG GCGCTACAAC CTGCGGCAAG CGCTCGGCAA TTCGGTCGAT
GTCCGTTTGA CCGAAGACCC CGAGGAAATC CAGGCTTTCC AGGCGCTTTA CGTCTCCATG
ATGGAACGGA AGCATTTTTC CAGCACCACG CCCGTTCATC TCACGGGCGA ATTGATCTCT
CGCCTGCCCG AAAAGCTTAA ACCGAAGCTC GTCATCGCCC GTCACGCGGG CAAGCTGGTT
GCGGGCGCAA CGATCGGACT GTTCGGAGAT ACCGCCTACT ACATGTTCGG CGCGACATCG
GCCGATGCCC TGCCGATCAA GGCCGGCTAC GCGCTCCACT GGTGGATATT CAACTGGCTG
CATGACCATG GATACGAGTG GTACGACTTG GGCGGCGCCG CGCATGAACC GGGCCTGCGT
CAGTTCAAGA AGGGATTCGT TGGTAAAGCG GGCAGCGTCG TCGTCATGGA GGGCGAGTTC
GACCGCTGGG CATCATCTCT CGGCCGCCTC TCGGCCGATA CCGTCTTCGG CCTTCGTCAC
CTCAAGCGGC GTATCCAGTA CGGCGCAAAA TTCGGCAAGC TGGCCGACCC ATCATCGTGA
 
Protein sequence
MLQQANVPPL GVAAPIDCPT PADRYSVEID SVASDAWDVI ASGFADIHPE QTACYASNHW 
KGHDSHLLLR HNGEPVAGAR VAIVGLPLIG RGLAFLRFGP FWRKQKAEAD PEIYRTMIAA
LVEEYCVTRG HCLTTLSRPH PHYHALECGL LRDLGFVQRR AFSDCERYVV NTALDAETQR
RSLAQKWRYN LRQALGNSVD VRLTEDPEEI QAFQALYVSM MERKHFSSTT PVHLTGELIS
RLPEKLKPKL VIARHAGKLV AGATIGLFGD TAYYMFGATS ADALPIKAGY ALHWWIFNWL
HDHGYEWYDL GGAAHEPGLR QFKKGFVGKA GSVVVMEGEF DRWASSLGRL SADTVFGLRH
LKRRIQYGAK FGKLADPSS