Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_0176 |
Symbol | |
ID | 4030769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 196682 |
End bp | 197683 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637968711 |
Product | ABC transporter related |
Protein accession | YP_575537 |
Protein GI | 92115808 |
COG category | [R] General function prediction only |
COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.102512 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTGGATA TCTTCAACGT GTTCCGCAAG CGGCCGCAAA AACGCGGGCC GCAAGCCTTT GCGCGGACCC AGGCGGACAT CACCGCGCTC GGCGATACCA TCGGCGACAT GCTGACCAGT CCGGTGCGCG ACGCTCCGCC GATCGCGCGC GGAGCCGACC GCGATGTTCC GCCTGTCGCG CCCGTTCCGC AATCCCGGCG GCCGGCGCGC CCCACGCCGG AACCTCCCCG CCCACGCGCC GCCTCCAACG GCGCCGCCGC GCCGCGGATG GCGAAGCGCC CCGGTTACCT CGCCGTGCAC GGCGTCGAAA AAAGTTTCGG CTCGCGTCAG GTCGTGCGCG GCGTCAGCAT CTATGTCCGC CGCGGCGAGG CGGTCGGGTT GCTGGGTCCG AACGGCGCCG GCAAGACCAC CGTGTTCTAC ATGATCACCG GCCTGATCCC GGCGGATCGC GGCGCGATCG AACTCGACGG TCACGACGTG ACGAAGCTGC CGATGTATCA GCGGGCGCGG CTCGGCATCG GTTATCTGCC GCAGGAAGCC TCGATCTTCC GCGGCCTCAG CGTCGAGCAG AACATCCGCG CCGTGCTCGA GGTCGTCGAG CCCAGCAAGA AGAAGCGCGA GGCCGAGCTC GATGCGCTGC TCGAGGAATT CAACATCAGC CGCTTACGCA AGACGCCGTC AATCGCGCTG TCCGGCGGCG AGCGGCGGCG CGTGGAAATC GCGCGCGCGC TGGCGACACG CCCGAGCTAC ATGCTGCTGG ATGAGCCGTT CGCCGGCATC GACCCGATCG CGGTCGGCGA CATCCAGGAC CTCGTACGCC ATCTGACCAA TCGCGGCATC GGCGTGCTCA TCACCGACCA CAACGTCCGC GAAACGCTGG GGCTGACCGA CCGCGCCTAC ATCGTCTACG CCGGCGAAAT CCTGACCGAG GGCAGCCCCG ACGAGATCGT CAACGATCCC GACGTGCGAC GCTTGTATCT CGGCGAGGAA TTCCGGCTGT AG
|
Protein sequence | MVDIFNVFRK RPQKRGPQAF ARTQADITAL GDTIGDMLTS PVRDAPPIAR GADRDVPPVA PVPQSRRPAR PTPEPPRPRA ASNGAAAPRM AKRPGYLAVH GVEKSFGSRQ VVRGVSIYVR RGEAVGLLGP NGAGKTTVFY MITGLIPADR GAIELDGHDV TKLPMYQRAR LGIGYLPQEA SIFRGLSVEQ NIRAVLEVVE PSKKKREAEL DALLEEFNIS RLRKTPSIAL SGGERRRVEI ARALATRPSY MLLDEPFAGI DPIAVGDIQD LVRHLTNRGI GVLITDHNVR ETLGLTDRAY IVYAGEILTE GSPDEIVNDP DVRRLYLGEE FRL
|
| |