Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_0171 |
Symbol | |
ID | 4029328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 192484 |
End bp | 192945 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637968706 |
Product | PTS IIA-like nitrogen-regulatory protein PtsN |
Protein accession | YP_575532 |
Protein GI | 92115803 |
COG category | [G] Carbohydrate transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
TIGRFAM ID | [TIGR00848] PTS system, fructose subfamily, IIA component [TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.125135 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGATTA CTGATCTGGT CGCACCCGAG GCGATCCTTC CTGCATTGAA GGTCAACAGC AAGAAGCAGG CGCTGCAGGA ACTGGCTGCG CGCGCCGCTG AATTGACCGG GCAGAACGAC CGCGCGATTT TCGAGGTGCT GTTGCGGCGC GAGAAGCTCG GAACCACGGC TGTCGGCTAC GGCGTCGCGA TTCCACACGG CAAGCTGCAA AAACTCGACA AGATATTCGG CCTGTTCGCA CGGCTCGACC GCCCGATCGA TTTCGAGGCG ATGGATGGCC AGCCGGTCGA TCTGATTTTC CTGCTGCTGG CACCCGAGGG CGCCGGCGCG GATCACCTGA AGGCGCTGGC GCGAATCGCG CGGCTGCTGC GCGATCAGGA TATTGCCAAC AAACTGCGCG CCTCGCGCGA TGCGCAGGCG ATCTACTCGG TGCTGGCGCT GCCGCCGGCG ACAGTCCCCT GA
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Protein sequence | MMITDLVAPE AILPALKVNS KKQALQELAA RAAELTGQND RAIFEVLLRR EKLGTTAVGY GVAIPHGKLQ KLDKIFGLFA RLDRPIDFEA MDGQPVDLIF LLLAPEGAGA DHLKALARIA RLLRDQDIAN KLRASRDAQA IYSVLALPPA TVP
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