Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_0165 |
Symbol | |
ID | 4029321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 185949 |
End bp | 187298 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637968699 |
Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
Protein accession | YP_575526 |
Protein GI | 92115797 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.672663 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACTCATT CCGGCCAACC GGCGCCGCTC GAGGCGCGAA AATGCCAGTC CCTGATCGGG CGCGTCCGGG TGCCGGGCGA CAAGTCGATT TCCCACCGGG CCCTGATTCT GGGTGCGCTG GCGGTCGGTG AAACCCGAAT CGCTGGACTT CTCGAGGGCG AGGACGTGCT CAACACCGCC AAGGCGATGC AGGCACTGGG GGCAAAGGTC GAACGGCGGA TCGACGACAA AAGCGGGATC GTCTGGTCGG TGCGCGGCGT CGGCACAAGC GGGTTCGCGA CGCCCGAGGC GCCGCTCGAT TTCGGCAATT CCGGCACCGG GTGCCGCCTG GTGATGGGCG CGGTGGCCGG TTGTCCGATA GTAGCGACCT TCGATGGCGA CGGCTCGCTG CGCTCGCGGC CGATGCGGCG CATTCTCGAT CCGCTCGAAC TGATGGGCGC GCGGGTGACG GGCGAGAGCG ACGGCGGCCG GCTGCCGCTG ACGCTCGCAG GCGCGCGCGA TCCGCTGCCG ATCGTGTACC GCACGCCGGT CGCATCGGCG CAGATCAAGT CGGCGGTGCT GCTGGCGGGA TTGTCGGCGC CGGGCATCAC CACCGTCATC GAGAGCGAGG CCAGCCGCGA CCACACCGAG CTGATGCTGA AGCATTTTGG CGCGCAGATT GTTTCCGTGT CCGACGGCAC ACACGGGCGC AAAATCTCGT TAACCGGACA GCCCGAACTG CACGGCGCCG CCGTCACGGT ACCGGCCGAC CCGTCATCGG CGGCGTTTCC GATCGTCGCC GCGCTGATCA CCGAAGGCTC CGACATCGTG CTGACCGACG TCATGACCAA CCCGTTGCGA ACCGGCCTGT TCGCCACGTT GCGCGAGATG GGCGCCTCGA TCGAGGAGAG CGAGACGCGC CTTGATGCCG GCGAGCCGAT GGCGCAACTA CGGGTGCGCG CCTCAAAGCT GCGCGGCGTC GAGGTGCCGG CCGCTCGCGC GCCGTCGATG ATCGACGAAT ATCTGGTGCT CGCGGTCGCG GCGGCGTTTG CCGAAGGCAC CACCGTGATG CGCGGGCTGC ACGAATTGCG CGTCAAGGAA TCCGATCGCC TCGAAGCCGC CGCCGCCATG CTGCGCGTCA ACGGCGTCGC GGTCGAGATC GCCGGCGACG ACCTGATCGT CGAGGGCCGC GGCCGCGTGC CCGGCGGCGG TCTGGTCACC ACCCACATGG ATCATCGCAT CGCGATGTCG GCGCTGGCGA TGGGCTGCGC GTCGGATGCG CCGGTCAAGG TCGACGACAC CGCCTTCATC GCCACGAGCT TTCCGGATTT CGTGCCGATG ATGCGGCGGC TGGGAGCGGA TTTCGCATGA
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Protein sequence | MTHSGQPAPL EARKCQSLIG RVRVPGDKSI SHRALILGAL AVGETRIAGL LEGEDVLNTA KAMQALGAKV ERRIDDKSGI VWSVRGVGTS GFATPEAPLD FGNSGTGCRL VMGAVAGCPI VATFDGDGSL RSRPMRRILD PLELMGARVT GESDGGRLPL TLAGARDPLP IVYRTPVASA QIKSAVLLAG LSAPGITTVI ESEASRDHTE LMLKHFGAQI VSVSDGTHGR KISLTGQPEL HGAAVTVPAD PSSAAFPIVA ALITEGSDIV LTDVMTNPLR TGLFATLREM GASIEESETR LDAGEPMAQL RVRASKLRGV EVPAARAPSM IDEYLVLAVA AAFAEGTTVM RGLHELRVKE SDRLEAAAAM LRVNGVAVEI AGDDLIVEGR GRVPGGGLVT THMDHRIAMS ALAMGCASDA PVKVDDTAFI ATSFPDFVPM MRRLGADFA
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