Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_0121 |
Symbol | |
ID | 4029563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 139683 |
End bp | 140237 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637968655 |
Product | ATP-dependent protease peptidase subunit |
Protein accession | YP_575482 |
Protein GI | 92115753 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.57821 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGCAT CACAGCCGGA GGTGTGGCAC GGCACCACGA TCCTGACCGT CCGCAAGGGC GGCAAGGTCG TTATTGGCGG AGACGGCCAG GTCTCGATCG GACAGACCGT CATCAAATCC AACGCGAAGA AGGTCCGGAA GCTCGGAAAA GGCGACGTGA TCGGCGGGTT CGCCGGCGCC ACCGCCGATG CCTTCACCCT GTTCGAACGG CTGGAGAGCA AACTCGAGCA GTACCCCGGC CAGCTCACCC GCGCCGCGGT CGAACTCGCC AAGGACTGGC GCACCGACCG CTATCTGCGG CGGCTCGAAG CCATGATGCT CGTCGCAGAC AAGGACGTGT CGCTGGTCCT GACCGGCACC GGGGACGTTC TGGAGCCGGA GGCCGGCGTG ATGGCGATCG GCTCCGGCGG AAACTACGCG CTTTCCGCCG CGCGGGCGTT GATCGATTCC GACAAGGATG CGGAAACGAT TGTCCGCCGC TCACTCGATA TCGCCGCCGA CATCTGCGTT TATACCAACC GAAACCTGAC GATCGAGACG TTGTCCACGG ATTGA
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Protein sequence | MQASQPEVWH GTTILTVRKG GKVVIGGDGQ VSIGQTVIKS NAKKVRKLGK GDVIGGFAGA TADAFTLFER LESKLEQYPG QLTRAAVELA KDWRTDRYLR RLEAMMLVAD KDVSLVLTGT GDVLEPEAGV MAIGSGGNYA LSAARALIDS DKDAETIVRR SLDIAADICV YTNRNLTIET LSTD
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