Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_0107 |
Symbol | |
ID | 4029608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 124093 |
End bp | 126141 |
Gene Length | 2049 bp |
Protein Length | 682 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637968641 |
Product | hypothetical protein |
Protein accession | YP_575468 |
Protein GI | 92115739 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1331] Highly conserved protein containing a thioredoxin domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.926575 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCACG CCGCTACAGG CTCGGGCCGT CCCGCGAATC GCTTGGCTGC GGAAACGAGC CCCTATCTGC TGCAGCACCA GCACAATCCC GTCGACTGGT GGCCGTGGGG ACCCGCGGCG CTCGCCGAGG CGCAGCGGAC CAACCGTCCG ATCCTGCTGT CAATCGGCTA CGCCGCCTGT CACTGGTGCC ATGTCATGGC GCACGAAAGC TTTGAGGACG ACGAAGTCGC CGCGGTGATG AACGAACTGT TCGTCTGTAT CAAGGTCGAT CGCGAGGAGC GGCCGGATAT CGATCAGATC TACATGAACG CGCTGCATCT TCTCGGCGAG CAGGGCGGCT GGCCGCTGAC GATGTTCCTG TCGCCCGACG GATCGCCGTT CTGGGGCGGC ACATATTTTC CGAAGCTGCC AGACTTCGGC CGCCCGGCAT TTACCGATGT GTTGCAGTCA GTGGCGCGGG TTTTTCACGA CAAACCCGAG AGGGTCACGC TGAACCGCGA TGCGGTGATC GCACGGCTCT CCGAGCGCGC TAAAGTGGGA AGTCCGGCGA ACCTCGGCGT CGCCGAACTC AACACCGCGG CCGTCTCCAT CGCGCGTTCA ACCGATCCGG TCAACGGCGG CCTACACGGC GCGCCGAAGT TTCCGCAATG CTCCGTGCTG GAATTTCTCT GGCGCGCCGG CGCGCGCACC GGAAGCGACC GTTTCTACGC AGCTACCACG CTGACCCTGA CGCAGATGAG CCAGGGCGGC ATCTACGATC ACCTCGGCGG CGGCTACGCG CGCTATTCGG TCGACGACAG ATGGCTGGTG CCGCACTTCG AGAAGATGCT TTACGACAAC GCGCAGATTC TCGATCTGCT CGCGCTCGAC TACGCGCGCA GCAAAAACCC GCTGTACCGC GAACGCGCGA TCGAGACCGT CGCTTGGCTG CTCCGGGAAA TGCTGACGGG CGAGGGCGGC TTTGCCTCCT CACTCGACGC CGACTCCGAA GGCAAGGAGG GCAAGTTCTA TGTCTGGTCG CTGAGCGAGA TCGAAGAGGT GCTCGGCGCT ACCGACGCCG CCGATTTTGC CGCGCGATAT GACATCACCG CAAACGGCAA TTTCGAAGGC CGCAACATTC CCAATCGTCT GAAGAGTTCT GATCTCGTCA GCGATGACGG CGCCCACATG CGGACGCTGC GCGCGAAACT GCTGGCGCGC CGCGCAGGCC GCGTCCGTCC GGGACTCGAC GACAAGGTTC TCGCCGACTG GAACGGCTTG ATGATCGCGG CACTCGTCCA CGGAGCCTGC GCCTTCGGCT TGCCGGACTG GCTGGAAACC GCCCGCACGG CCTTCGAGTT CATCCGGAAG ACAATGACGC GCGGCGACCG GCTCGGCCAT TCCTGGCGCG AGGGCCGGCT GCTGGTGCCG GCGCTGGCTT GCGACTATGC CGCGATGGTC CGCGCCGCGC TCGCGTTGAG TGAGGCGACC GGCGACACCG CGTATCTGGA GCAGGCGCTG CGCTGGCAGG CCACCCTTGA CACCCATTAC GCCGACGTCG AGCACGGCGG CTATTATCTC ACGGCCGACG ACGCGGAGGG GCTGATCGTG CGGCCGCACT CGACAATCGA CGATGCCATC CCGAACTATA ACGGACTGAT TGCGCAAAAC CTGGTGCGCC TCGCGGCGCT GACCGGCGAT TCGAAGTGGC GCGACCGGAT CGACGCCCTG TTCGGCGCGC TGCTGTCCCG CGCGGCCGAG AACGGCTTTG GCCATCTGGC GCTACTGAGT GCGCTCGACC TCCGTCTGAC CGGTGCGGAA ATCGTCGTGG TCGGCGAGGG TGCACAAGCC GAAGCGCTGC TCGCCGCCGC GCGCGCGCTG CCGCACGCCA CGAGCATCGT GCTTCATGTA TCGCGTGGCG ATGCGCTGCC GGCCGAACAT CCGGCGCGCG CCAAGGCCGA TTCCGTGCAA GGCGCGGCAG CGTTCGTGTG CCGCAATCAA AGTTGCTCGT TGCCGGTAAC GACGCCGCAG GCGCTTGTCG ATCTGGTGAT GCAGCGAACC TCTGCATAG
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Protein sequence | MNHAATGSGR PANRLAAETS PYLLQHQHNP VDWWPWGPAA LAEAQRTNRP ILLSIGYAAC HWCHVMAHES FEDDEVAAVM NELFVCIKVD REERPDIDQI YMNALHLLGE QGGWPLTMFL SPDGSPFWGG TYFPKLPDFG RPAFTDVLQS VARVFHDKPE RVTLNRDAVI ARLSERAKVG SPANLGVAEL NTAAVSIARS TDPVNGGLHG APKFPQCSVL EFLWRAGART GSDRFYAATT LTLTQMSQGG IYDHLGGGYA RYSVDDRWLV PHFEKMLYDN AQILDLLALD YARSKNPLYR ERAIETVAWL LREMLTGEGG FASSLDADSE GKEGKFYVWS LSEIEEVLGA TDAADFAARY DITANGNFEG RNIPNRLKSS DLVSDDGAHM RTLRAKLLAR RAGRVRPGLD DKVLADWNGL MIAALVHGAC AFGLPDWLET ARTAFEFIRK TMTRGDRLGH SWREGRLLVP ALACDYAAMV RAALALSEAT GDTAYLEQAL RWQATLDTHY ADVEHGGYYL TADDAEGLIV RPHSTIDDAI PNYNGLIAQN LVRLAALTGD SKWRDRIDAL FGALLSRAAE NGFGHLALLS ALDLRLTGAE IVVVGEGAQA EALLAAARAL PHATSIVLHV SRGDALPAEH PARAKADSVQ GAAAFVCRNQ SCSLPVTTPQ ALVDLVMQRT SA
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