Gene Nham_0093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0093 
Symbol 
ID4029632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand- 
Start bp108887 
End bp109336 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content67% 
IMG OID637968627 
Productcyclic nucleotide-binding domain-containing protein 
Protein accessionYP_575454 
Protein GI92115725 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.132878 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGATCG ACGATGACGT TGTCCTGCTT GAGCGCGTTC CGACTCTGCG CCTGTTGGGC 
GCCGAGGCGT TGCGCGTGCT CGCCATCGGC GCCGAACAGC AGCAGTTCGC CCGCGGTTCG 
ATCCTGTTTC GCGCCGGCGA CGAGGCGGAC GCAGGATACG TCGTTCAGGA AGGCGGCTTT 
CGCATTCATG TCGAGGACGG CCGCGATCGG GAAGTCGTCG CCGAACGCGG CACGCTCATC 
GGCGAGTTGG CCCTGATCGT CCCGATGTCG CGGCCGGCCA CCGCGACCGC GCTGGAATAT 
TCGATGGCGA TCCGCATTCC GCGCACCCTG TTCCTGCGCG TGCTCGACAG CGATCCCGCC 
GCCGCCCGCC GCCTTCGCGA CGAACTCGCC AATCGCACCC GGCAAACGAC CGGCGATATC 
CTGATGGCGT CGGCGAAGCT GAGTGGCTGA
 
Protein sequence
MSIDDDVVLL ERVPTLRLLG AEALRVLAIG AEQQQFARGS ILFRAGDEAD AGYVVQEGGF 
RIHVEDGRDR EVVAERGTLI GELALIVPMS RPATATALEY SMAIRIPRTL FLRVLDSDPA 
AARRLRDELA NRTRQTTGDI LMASAKLSG