Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_0087 |
Symbol | |
ID | 4029626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 100358 |
End bp | 101218 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637968621 |
Product | acyl-CoA thioesterase II |
Protein accession | YP_575448 |
Protein GI | 92115719 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1946] Acyl-CoA thioesterase |
TIGRFAM ID | [TIGR00189] acyl-CoA thioesterase II |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0787884 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAAAA GCCTGATCGA CCTGATCTCG ATCCTCGATC TGGAACCGAT CGAGGAAAAC CTGTTCCGCG GCAACAGCCC GAAGACGAGC TGGCAGCGGG TGTTCGGCGG GCAGGTGATC GGGCAGGCGA TGGTGGCGGC CTGCCGCACC GTCGAAGGCC GCCTGCCGCA CTCGCTGCAT TGCTACTTCA TCCTGCCGGG CGATCCCGCC ATCCCGATCA TCTACGAGGT GGAACGGTTG CGCGACGGCA AGAGCTATTC GACACGGCGC GTCACCGCGA TCCAGCACGG CCACGCCATT TTCTCGACCA TGGTGTCGTT CCATGCGCCG GAGCAAGGCG CCTTCGATCA TCAGGACCGG ATGCCGGACG TGCCGCCGCC GGAGAAGCTC ACGCCGGAGG AATTCGCCAA GCAGCCGATG TTCAAGGAGA TGCCGGACTT CATCCGCCGC TACTATGAAT CGGACCGGCC GATCGAACTG CGTCCGGTCG AACTCAACCG CTACTTCGGT GAGAGGATCG ACGACGGCCG TACCCATGTC TGGATTCGCA CCGCGGCGAA ACTGCCCGAC GATCCGGCGC TGCACATGTG CGCGCTGGCC TATGCGTCGG ATTTTTCGTT GCTCGATGCG GTGATGGCGC GCTACGGCCG CACCCTGTTC GACAAGCGCA TGATGGCGGC TTCGCTCGAT CACGCCATGT GGTTTCACCG CCCCTTCCGC GCCGACGAAT GGCTGCTCTA CGCGCAGGAT TCGCCGAGCG CCCGGGACGG CCGCGCCCTC GCCCGCGGCC TGATCTTTCG GCGGGACGGC ACGCTGGTCG CCTCCGTGGT GCAGGAAGGT GCGGTGCGCG AGCGGCGCTA G
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Protein sequence | MSKSLIDLIS ILDLEPIEEN LFRGNSPKTS WQRVFGGQVI GQAMVAACRT VEGRLPHSLH CYFILPGDPA IPIIYEVERL RDGKSYSTRR VTAIQHGHAI FSTMVSFHAP EQGAFDHQDR MPDVPPPEKL TPEEFAKQPM FKEMPDFIRR YYESDRPIEL RPVELNRYFG ERIDDGRTHV WIRTAAKLPD DPALHMCALA YASDFSLLDA VMARYGRTLF DKRMMAASLD HAMWFHRPFR ADEWLLYAQD SPSARDGRAL ARGLIFRRDG TLVASVVQEG AVRERR
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