Gene Nham_0079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0079 
Symbol 
ID4029617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp90511 
End bp92751 
Gene Length2241 bp 
Protein Length746 aa 
Translation table11 
GC content65% 
IMG OID637968612 
Producthypothetical protein 
Protein accessionYP_575440 
Protein GI92115711 
COG category[S] Function unknown 
COG ID[COG3673] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCCGGA AAATCGTTCT GCTGTCCGAC GGCACCGGAA ACTCCGCTGC AAAAGTCTGG 
CGCACCAATG TCTGGCGCAC GTTCGAGGCG ATCGATCTTT CGGGGGCGGA TCAGGTGGCG
TTCTACGACG ACGGGGTCGG CACCTCGTCG TTCAAGCCGC TCGCCATTCT CGGCGGCGCT
TTCGGCTTCG GGCTGAAACG CAACGTCATC GACATCTACA AGTTCGCCTG CCGCAACTGG
CGCGACGACA GCGATGAGTT ATTCGGCTTC GGCTTCAGCC GCGGCGGCTT CACCATCCGC
GTGGTGATGG GACTGATCCT CAATCAGGGG CTTGTCGCCG CCGACAGCGA GGCCGAATTG
TCGCGCAAGG CCAAGGCCGC CTATCGCCAG TATCGGCGCG AGCGCTTCCA TACGGTCTGG
CACATCGAGG ACATCTTCCG CGGCATCCGC GACCTGTTTC TGCGGAAAGG CTACGACAAG
CGCGACAATC GCCGGGTGGA CCATATCCGC TTCATCGGCG TGTGGGACAC CGTCGCCGCC
TACGGCCTGC CGCTCGACGA GATGACGCGC GGCGTCAGCA AATGGATCTG GCCGCTGGAG
CTGCCCAACC ACACGCTCGA CTGCACGCGC GTCAGGCGCG CCTGTCAGGC GCTGTCGCTC
GACGAGCCGC GCACCACCTT CCATCCCGAA TTGTGGGACG AGCGCGGCGC GCCGCCGCTC
GCCCCGCGCG ACGACGGCAA CCGCCATCTC GCGGACGAGC AGATCAGCCA GGTCTGGTTC
GCCGGCGTGC ATTCCAACGT CGGTGGTGGC TATCCGGACG ATGCGCTGGC CTTCATCCCG
CTGGTCTGGA TGCTGAGGCA GGCGGGGGCC TGCGGTCTGC GCCTCAAGTC GGATCGGGCG
ACGCCGCCGG CCGATCCCGA TCCGCTCAAG AACGCCATCT CGATGTGCGA CAAGGACGGG
CGGCTGTACG ATCCGCGCAA GGGGCTCGGC AGCTACTATC GCTACGGCCC GCGCAAGCTG
GCCGAGCTAT GCGACTTTCG TTTCTCCAGG AACGACGAAG TCGTCGTCGC GCGACCGAAG
GTGCATGTCA GCGCGTTCAA GCGCATCGCC AGCCGCTCGC AAGACTATGC GCCGGTCGGG
CTGCCGAAGA TTTATGATGT CGTGACCGAC GACGGACTGG TGCTGACACC GGATCAATAC
GGCTTCGAAA GCAGCGCCAG GGCACTCGCG CGCACCGAAA CGCAGGAGCA TGTCTGGAAC
GAGATCTGGA AACGGCGGCT GGTCTACTTC GCCACCGTCG GCTCCACCGC ATGGCTGTTG
CTCTATCCGC TGGCGCGCTC GCTGCCGGCG GCGGATGAAT ACACCAGCCC GATCCGCTGG
GTGTCGGACA TCATCCGCAT TGTCGGCGGG TTTCTTCCGG GCTTCGCGCA AACCTGGATC
AACGCCTATG CGCGCAGTCC GGGCCAGTTC CTTGTCCTGC TCGCGCTCGC GGGTGGTTTG
ACGTTCTGGG GGACGCGGCT CGCAACCCGC ATCTCGGATT CGATGAATGC GATCTGGCAG
CGAACGCCGA CGGCGCCGAC AGGCTTGCCG ACCAACTGGA TCTACCGGCT GCGCGCGAGC
GGGCCCTATA TCTGGTTTCA CCGGCAGTTG AAGCGCCGCT GGGCGCCGAC GTTCTTTGCA
GGCTTGTTCG TCTATCTCGG CATCACCCTC GGTAGCCATC TCATCTACAA CGTGCAGGAC
GTCGCCGGCT GGACTTGCAA CGAAAGCCCG AAGGTGCGGG GGCTCGCGCG CGGCGAGCAG
GCGACGTTCG ATTTCAGCAC GTCGCACTTC TGCGCCGGCA CCGGCATCGC GGTGGACGGG
TTCGGCGCGC GCTATCTGGT CCAGGTCGAG ACCACGACGC CATGGCAGGA CGGAGATATC
CCGTCGCCGC TGGGCGGGTT CTACACCACC GATGCGCCGC GCTGGTCGCA ACGCGTGTGG
CTGATGCTCG GCGTTCCCCT GCGCCGCGAA CTGACGCGGC CCTGGTTCCG CCTGGTGCTG
CGCTATGGCA CGACCGGCGG CGAGGAGGTC TTCCTCGATC CCGATCCCGA GGACGGCAAG
GTCGAGACGA TGATCCGGCC GACACGCAGC GGCGAACTTT TCATCTTCGT CAACGATGCG
GTGCTGGGCA TTCCCGGACT CTATGATGTG TTTTATCGCA ACAACGAAGG CTCCGCCAAA
CTGGTGGTGA CGCGCAAGTG A
 
Protein sequence
MGRKIVLLSD GTGNSAAKVW RTNVWRTFEA IDLSGADQVA FYDDGVGTSS FKPLAILGGA 
FGFGLKRNVI DIYKFACRNW RDDSDELFGF GFSRGGFTIR VVMGLILNQG LVAADSEAEL
SRKAKAAYRQ YRRERFHTVW HIEDIFRGIR DLFLRKGYDK RDNRRVDHIR FIGVWDTVAA
YGLPLDEMTR GVSKWIWPLE LPNHTLDCTR VRRACQALSL DEPRTTFHPE LWDERGAPPL
APRDDGNRHL ADEQISQVWF AGVHSNVGGG YPDDALAFIP LVWMLRQAGA CGLRLKSDRA
TPPADPDPLK NAISMCDKDG RLYDPRKGLG SYYRYGPRKL AELCDFRFSR NDEVVVARPK
VHVSAFKRIA SRSQDYAPVG LPKIYDVVTD DGLVLTPDQY GFESSARALA RTETQEHVWN
EIWKRRLVYF ATVGSTAWLL LYPLARSLPA ADEYTSPIRW VSDIIRIVGG FLPGFAQTWI
NAYARSPGQF LVLLALAGGL TFWGTRLATR ISDSMNAIWQ RTPTAPTGLP TNWIYRLRAS
GPYIWFHRQL KRRWAPTFFA GLFVYLGITL GSHLIYNVQD VAGWTCNESP KVRGLARGEQ
ATFDFSTSHF CAGTGIAVDG FGARYLVQVE TTTPWQDGDI PSPLGGFYTT DAPRWSQRVW
LMLGVPLRRE LTRPWFRLVL RYGTTGGEEV FLDPDPEDGK VETMIRPTRS GELFIFVNDA
VLGIPGLYDV FYRNNEGSAK LVVTRK