Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_0075 |
Symbol | rplT |
ID | 4029651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 87949 |
End bp | 88308 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637968608 |
Product | 50S ribosomal protein L20 |
Protein accession | YP_575436 |
Protein GI | 92115707 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0292] Ribosomal protein L20 |
TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCGCG TCAAGCGCGG TGTGACGGCT CATGCCAAGC ACAAAAAAGT CTACAAGATC ACCAAGGGCT TTTCCGGCCG CCGGAAGAAC ACCATTCGCG CCGCCAAGGC GGCCGCCGAC AAGGCCGGCC AGTACGCCTT CCGCGATCGC AAGCGCAAGA AGCGCACCTT CCGTGCGTTG TGGATCCAGC GTCTCAACGC CGCGGTGCGG CCGTTCGGCA TGACTTACAG CGTGTTCATC AACGGGCTGT CGAAGTCGGG CATCACCGTC GACCGCAAGG TGCTGTCGGA CCTCGCCATC AACGAGCCCG CCGCGTTCCA GGCGATCGCC GAGAAGGCCA AGGCCGCGCT CGCGGCCTGA
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Protein sequence | MARVKRGVTA HAKHKKVYKI TKGFSGRRKN TIRAAKAAAD KAGQYAFRDR KRKKRTFRAL WIQRLNAAVR PFGMTYSVFI NGLSKSGITV DRKVLSDLAI NEPAAFQAIA EKAKAALAA
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