| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0053 |
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| Symbol | |
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| ID | 4029763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 58867 |
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| End bp | 61383 |
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| Gene Length | 2517 bp |
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| Protein Length | 838 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637968586 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_575414 |
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| Protein GI | 92115685 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGACG TAGTCGCGGT GATGCGTCGG ACCTTGCTGT CATGCACTTC GCTGGTGCCG
GGCGGCATCG CCGGTGCTGG CGCGGCATGC CTCGTCGACA TATCGCCCGC ATGGGCCACG
GAACCGGGCT TGTCCGAGCG GCTGATCCAG ACCTTCACGA ATCTCAGCAG GCCGGATCTG
ACTGCGCTGG CGCTGGCGCT GGGCGTGCTC GGTTTCTCGG TGGTCGCCGC TATCCTCCTG
ATGCGCACGC GCATCCGCGC CGCCGCGAAC GAACAGCGGC TGCGCACCGA AATCCGCGAA
CTTCAATCGG ACGCCGACCG CTTTCGCGCG CTATTGTTCG CAGAACCGCA GGTTTTGATT
TCCTGGGGTG CGGGCGAGGA CCGCCCCCAA ATCAGCGGCG ACATCGCGCT GCTGTTGCCG
CAGGATGCAA AACCGCCTTT GCGGATTCTT GCGTTCGGCA CCTGGCTGCC ACCCGAACCG
GCGTTGCAGA TGGATCATGC GGTCGATGCG CTGCGTAACG CCGGGGAAGG TTTTCTGCTC
AATCTGGTCA CGTCGGCGGG GCGGACCGTG GAAGCCATGG GCCGCGCCAT CGGCGGCCAG
GCCATCGTGC GTATCCGCGA CCTCGGCGGA TTGCGGCGCG ACCTCGCCGA GACGACGCTG
CGCCACAACA GCCTGCTGGC AGAAACCGGG ATGCTGCGGG CCTTCGCAGC CGCGGCGCCA
TGGCCGCTCT GGGCCCGCGG CGAAGACGGC AACCTCAATT TCGCCAATGC CGCCTATGCG
CGCGCCACGG AAGCTGCGAG CGCCACCGAT GCAATCCAGC GCAATCTCGA ACTGCTCGAC
AGCGACGACC GCATCGCGAT GGCGCGGGCG CTGAACGACC ATGCCGCCTT TGCCGCGCGA
TTGCCGGTCG TGATCGGCGG CGAGCGACGG ATGTATGACG TTCACGCGCT CCGGGCTGCA
GGCGGAAGCG CCGGCATCGC GCTCGACGCC AGCGAGACCG CGGCGCTGAG CCAGGCACTG
GAGCGGATGG CGGACGCGCA TCGCCGTACC CTCGACCAGT TGTCATCCGG TGTCGCCGTG
TTCGACGGCC AGCGGCGGCT TGCGTTCTAC AACGATTCCT ATCGCCGGCT GTGGGACCTC
GACCGCGCCT TTCTCGACGG CAATCCCAAC GATTCCAGCG TGCTCGATCG GCTGCGCGCC
GCGCGCAAAT TGCCGGAGCA GCCGGACTTC CGCGCCTGGA AGGCCCGCCT GCACGAAGCC
TATCGCGCCA ACGAAGCCGC CAAGGACGTC TGGTATCTGC CGGACGGACG CGCGCTCAGC
ATCGTCACAA CGCCGAACCC CGAAGGCGGC GTCACCTATC TGTTCGACGA TGTCACGGAA
AGTCTCGAGC TTGCGCGGCG TTACGACCGA CTCATCACCG TGCAACGCGA GACCCTGGAC
AGCCTGACCG AAGCCGTCGC GGTGTTCGGC AGCAACGGCC GCGCGCAGCT TTTCAACCCG
GCCTTCGCCC GGATGTGGAA GCTTTCGCCC GAGGCGCTCT CGCAGCAGCC GCATATCGAT
ACCGTCGAGG GCTGGTGCAA GCCGCTATTC GACGACGACG ACGCGTGGCA GACGATCCGC
AACGCCGTCA CCGGCATCGA CAATCGAAGC GCGGTGCGGC TCAAGCTCGA GCGCAAGGAC
GGCAGCGTGC TGGACTGCAT GACCATGCCG CTGCCCGACG GCGCCACCAT GCTGACGTTC
CACGACATCA CCGACAGCGA GAATGTGGAA CGCGCGCTGC GCGAGCGCAA CGATGCGCTC
GAGACCGCCG ACCAGATGAA GGTCGATTTC GTCCATCACG TCTCGTACGA GCTGCGTTCG
CCTTTGACCA CCATCATCGG CTTCGCGCAC CTCATGAACG ATCCCGGCAC CGGGCCGCTC
ACCGAAAAGC AGGCCCAGTA TATCGACTAC ATTACCTCGT CGACCGACGC GCTGCTGGCG
CTGACCAACA ATATTCTCGA CCTCGCCACC ATCGACGCCG GCGCGATGAC GCTCGAGCTC
GGGCCGGTCG ATGTCCGCAA AACCATCGCG GCGGCAACGG AGGGCATTCA GGACCGCCTG
ACCCGCGAGC GAATCGTCCT GGAGGTCGAT GTCGATCCGG ACATCGGCAA CTTCATCGGC
GACGAGCGCC GTATCATTCA GGTCCTCTAT AACCTGCTTG CCAACGCCGC CGGCTTCTCG
CCGCAGGGCG CCGTGATCGC GGTGAGCGCC CGGCGCACCG CGCACAGCGT CAGCTTTGCC
GTCACGGACG ACGGCCCCGG CATTCCGCCT GAGGTCAAGG ACAAGGTATT CGACTGGTTC
GAGAGCCGCG CCAACGGCTC GCGACATCGC GGCGCGGGCC TCGGCCTGTC GCTGGTGCGC
TCCTTTGTGG AACTCCATGG CGGGCGCGTG CATTTCGACC CGACCGTCAA GCGCGGCACC
AGGGTCGTCT GCGACTTTCC GCTCGACCAG ACCGCGCATC GCAACGCCGC GGAATGA
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| Protein sequence | MSDVVAVMRR TLLSCTSLVP GGIAGAGAAC LVDISPAWAT EPGLSERLIQ TFTNLSRPDL
TALALALGVL GFSVVAAILL MRTRIRAAAN EQRLRTEIRE LQSDADRFRA LLFAEPQVLI
SWGAGEDRPQ ISGDIALLLP QDAKPPLRIL AFGTWLPPEP ALQMDHAVDA LRNAGEGFLL
NLVTSAGRTV EAMGRAIGGQ AIVRIRDLGG LRRDLAETTL RHNSLLAETG MLRAFAAAAP
WPLWARGEDG NLNFANAAYA RATEAASATD AIQRNLELLD SDDRIAMARA LNDHAAFAAR
LPVVIGGERR MYDVHALRAA GGSAGIALDA SETAALSQAL ERMADAHRRT LDQLSSGVAV
FDGQRRLAFY NDSYRRLWDL DRAFLDGNPN DSSVLDRLRA ARKLPEQPDF RAWKARLHEA
YRANEAAKDV WYLPDGRALS IVTTPNPEGG VTYLFDDVTE SLELARRYDR LITVQRETLD
SLTEAVAVFG SNGRAQLFNP AFARMWKLSP EALSQQPHID TVEGWCKPLF DDDDAWQTIR
NAVTGIDNRS AVRLKLERKD GSVLDCMTMP LPDGATMLTF HDITDSENVE RALRERNDAL
ETADQMKVDF VHHVSYELRS PLTTIIGFAH LMNDPGTGPL TEKQAQYIDY ITSSTDALLA
LTNNILDLAT IDAGAMTLEL GPVDVRKTIA AATEGIQDRL TRERIVLEVD VDPDIGNFIG
DERRIIQVLY NLLANAAGFS PQGAVIAVSA RRTAHSVSFA VTDDGPGIPP EVKDKVFDWF
ESRANGSRHR GAGLGLSLVR SFVELHGGRV HFDPTVKRGT RVVCDFPLDQ TAHRNAAE
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