Gene Nham_0043 details

Gene Information

• Locus tag: Nham_0043
• ID: 4029753
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 48031
• End bp: 48528
• Gene Length: 498 bp
• Protein Length: 165 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637968576
• Product: ferric uptake regulator family protein
• Protein accession: YP_575404
• Protein GI: 92115675
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0735] Fe2+/Zn2+ uptake regulation proteins

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGTACGA ACGAGAACAT CGTGATTGTG GCCGAAAAAG ACGTTGACGT CGCGGCGATC 
CGCCACGGAC GGCAGCCCAC GCTAACGGGT TGTCCGTGGC ACGACGTCAA TGAAATGCTG 
CAATCGGTGG GTCTGCGGCC GACTCGGCAG CGCATGGCGC TGGGCTGGCT GCTGTTCGGC 
AAGGGTGCGC GCCATCTCAC GGCGGAAATG CTCTACGAAG AAGCGACCAT CGCCAAGGTT 
CCGGTCTCCC TCGCCACGGT CTACAACACG CTCAACCAGT TGACCGACGC CGGACTGCTG 
CGGCAGGTCA GCGTTGACGG CACCAAGACC TATTTCGATA CCAACGTTAC CGCGCACCAC 
CACTTCTATC TCGAGAACAA TCACGAGCTG GTCGACATCC CGGACCCGCA TCTCGTATTG 
CAGAAGATGC CGAACGTGCC GGAGGGTTAC GAGATCAGCC GCATCGACAT GGTGGTGCGG 
CTGCGCAAGA AGCGCTGA 

 

Protein sequence

MSTNENIVIV AEKDVDVAAI RHGRQPTLTG CPWHDVNEML QSVGLRPTRQ RMALGWLLFG 
KGARHLTAEM LYEEATIAKV PVSLATVYNT LNQLTDAGLL RQVSVDGTKT YFDTNVTAHH 
HFYLENNHEL VDIPDPHLVL QKMPNVPEGY EISRIDMVVR LRKKR