| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0042 |
|---|
| Symbol | |
|---|
| ID | 4029752 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 46736 |
|---|
| End bp | 47260 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637968575 |
|---|
| Product | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase |
|---|
| Protein accession | YP_575403 |
|---|
| Protein GI | 92115674 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases |
|---|
| TIGRFAM ID | [TIGR01749] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGACC GGCGCAGCAG CTATGACTAT GAGGGTTTGC TGGCCTGCGG CCGGGGCGAG
CTGTTTGGAC CGGGAAACGC CCAGTTGCCG TTGCCGCCGA TGCTGATGTT CGACCGGATC
ACCGAAATCA CCGAAGATGG CGGGGAGTTC GGCAAGGGAT TGATCCGCGC CGAGCTCGAT
GTGAAATCCG ACCTCTGGTT CTTCGGCTGC CACTTCAAGG GCGATCCGGT GATGCCCGGC
TGCCTCGGCC TCGACGCGCT GTGGCAGATG GTCGGATTTT ATCTCGGTTG GACCGGCGGC
GAAGGCCGGG GCCGCGCACT CGGTCTCGGT GACCTCAAGT TTTCCGGTCA GGTGCTGCCG
CACGTCCGCA AGGTCGTGTA CAACGTCGAT ATCAAGCGCG TGATGCGCTC GAAGCTGGTG
CTCGGGATCG CGGACGGGTG GCTTTCCACC GACGGCGATA TTATCTATCG CGCGAAAGAC
CTGAAGGTCG GTCTGTTCAA GCAGGATGCC GCGCCGGGGA CATGA
|
|---|
| Protein sequence | MQDRRSSYDY EGLLACGRGE LFGPGNAQLP LPPMLMFDRI TEITEDGGEF GKGLIRAELD
VKSDLWFFGC HFKGDPVMPG CLGLDALWQM VGFYLGWTGG EGRGRALGLG DLKFSGQVLP
HVRKVVYNVD IKRVMRSKLV LGIADGWLST DGDIIYRAKD LKVGLFKQDA APGT
|
|---|
| |