Gene Nham_0028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0028 
Symbol 
ID4029795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp29091 
End bp29882 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content65% 
IMG OID637968562 
Producthypothetical protein 
Protein accessionYP_575390 
Protein GI92115661 
COG category[S] Function unknown 
COG ID[COG0779] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGATC CCGTTGACCA GATCCCCGAC CATGAGCTGC TCGACGAGCC GCGTCTGGTG 
GTCGAGCCCG GCGTCGCCGC GCGCGTCTCG TCGGTCGTCG CCCCGGTCCT GCAAGGCATG
GGATACCGCC TGGTCCGCAT CAAGGTGTCG GGCGAATACG GCTGCACGGT CCAGATCATG
GCCGAGCGGC CTGACGGATC GATGCAGATA GAGGATTGCG AGGCGATCTC GAAGGCCCTG
TCGCCGGTGC TCGATGTCGC CGATCCGATC GACAAGGCCT ATCGGCTGGA AATCTCCTCG
CCCGGCATCG ACCGGCCGCT GGTGCGCCGG TCCGACTTCG AACGCCACGC CGGCCACCTC
GTGAAGGTCG AGATGGCCGT CGCTCACCAG GGCCGCAAGC GGTTCCGCGG CATCCTTCAG
GGCGTCAAGG ACAACGCGAT ACGCCTGCAT CGGGACGACG TGCAAAATGT CGACGAAAGC
GAGGTCCTGC TGGTCATGGA GGATATCGCC GACGCCCGGC TGGTTCTGAC CGACGAGTTG
ATTGCGGAAT CGATGCGGCG GGGCAAGATC GCGGAACGCG AGATGAAGCG GGATCTCGGC
ATTCTGCCCC CGCCTCCGCC GCACGCGAAA AACGATCCGG CCAGGAGCCC GGCGAGGCGT
AACGCGCCGA AACCGAAACT CAAGAGCACG GCGAAAGCCC ACGAGAAGAA GCCGCCGAAG
AACACCAAGG AACATCGTCT GGCCGCGGAA AGACTGCGGC GCGGCGAGAT CGATCCCATC
GAAGGAGAAT AA
 
Protein sequence
MTDPVDQIPD HELLDEPRLV VEPGVAARVS SVVAPVLQGM GYRLVRIKVS GEYGCTVQIM 
AERPDGSMQI EDCEAISKAL SPVLDVADPI DKAYRLEISS PGIDRPLVRR SDFERHAGHL
VKVEMAVAHQ GRKRFRGILQ GVKDNAIRLH RDDVQNVDES EVLLVMEDIA DARLVLTDEL
IAESMRRGKI AEREMKRDLG ILPPPPPHAK NDPARSPARR NAPKPKLKST AKAHEKKPPK
NTKEHRLAAE RLRRGEIDPI EGE