Gene Nham_0025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0025 
Symbollnt 
ID4029792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp25714 
End bp27339 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content65% 
IMG OID637968559 
Productapolipoprotein N-acyltransferase 
Protein accessionYP_575387 
Protein GI92115658 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0815] Apolipoprotein N-acyltransferase 
TIGRFAM ID[TIGR00546] apolipoprotein N-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCCTGA GCCTTGCAGG CAGCGCCCGG ACCACGGGCC TTGCCGTCAC GCTGTCATGG 
GGCTGGAAGC GCGCCGTCAT TGCGCTTCTC GCCGGCGCTG CGTCTTCGCT TGCGATGGAA
CCGTTCAATG CCTGGCCGTT GCTGTTCGTC ACCTTTCCGA TCGCGATCTG GCTGATCGAC
GGCGCCGGCG CTGGGCGCAT CGGCGGCGTG CCGGCCGCGG CGCTGGCGGG ATGGCTGTTC
GGCTTCGGCT ATTTCGTTCC GGGGCTGTAC TGGATCGGCA ACGCCTTTCT GGTCGATGCC
CAGACCTTCG CATGGCTGAT GCCGTTCGCC GTCATCGGCC TGCCGGCCTA TCTCGCACTC
TTTACGGCGC TCGGTTTCGC CCTGGCGCGC TTGATCTGGA CCCGGGACGC CTCGCGCATT
CTCGCGCTCG CCGTGGCGCT CACGGTCGGC GAATGGCTGC GCGGGCATGT CCTGACGGGA
TTCCCGTGGA ATGCATTCGG CTATGCGCTG ACCGAACCGC TGGCGCTGGC GCAAACCGCG
TCGCTGATCG GACTGTGGGG TCTGACATTC CTCAGCGTCG CGATCTTCGC AAGCCCCGCC
GTGCTGATCG ACGGACGCAG CCGCAGCCAA AGACCATGGA TCGCCCCGGT CACCGCCGTC
AGTCTGCTCC TCGCCATGGG TGTCTACGGC GCGGTCAGGC TGTCGCGTCA TCCGACGGAG
TTCACAGACA ACGTCAAACT GCGCATCATG CAGCCCAATC TGGCGCAGGA CGTTCGCTTC
AACTATTCCG CCAAGGCGGC GGTGATGCAC AAATATCTGA CGCTCTCCGA CCGCGCCACC
GGACCGCATT CGACCGGCGT CAGCAGCGCC ACCATCCTGA TCTGGCCGGA ATCGGCGTTC
CCGTTTTTTC TCACCCGCGA AGCCGACGCC ATGGCCGAGA TCGCCGACCT CTTGCCGAAG
GGCACGATCC TGATTACCGG CGCGGTGCGC GCGCCCGACC TGCCGCCGGG CGTCAGGATC
ACCCGGGCCT ACAACTCGAT CTATGTCATC GACGACGACG GAACTATCCT TTCAACTTAC
GACAAGCTCC ACCTGGTGCC GTTCGGCGAA TTTTTGCCGT TCCAAGGCCT GATGGAAAAG
CTCGGCTTCG TTCAGCTCAC CAAGGTTCAG GGCGGCTTCA TTCCGGGGAC GGGGCGGCGG
ACCATCGCAC TTCCGAACGC GCCGAGCGTG CTCCCGCTGA TCTGCTATGA GGCGATCTTC
CCGGGCGACA TCGAATCCCG CGGCGGCCGG CCCGGCTGGA TCGTCAACCT CACCAACGAC
GGCTGGTTCG GGATCAGCAC CGGGCCCCAT CAGCACCTTC AGCAGGCGCG GATGCGGGCG
ATCGAGGAAG GACTACCCCT TGTGCGCGCG GCGAACACCG GTATTTCGGT GGTCACCGAT
CCCGTAGGGC GTATTGTTGC ACAGCTCGAT CTCGGCGTCG AAGGCGTGCT GGATTCCCGC
CTGCCCGTTG CGATTGCGCC GACGCCCTAC GCCCGCGCGG GGGATATTCC CGCCGCAATC
ATGGTGACCA TCGCGCTTGT GGTGGTGATT CGACGGCGGC GCGAGCACGA GCGACGACGC
GTATAG
 
Protein sequence
MSLSLAGSAR TTGLAVTLSW GWKRAVIALL AGAASSLAME PFNAWPLLFV TFPIAIWLID 
GAGAGRIGGV PAAALAGWLF GFGYFVPGLY WIGNAFLVDA QTFAWLMPFA VIGLPAYLAL
FTALGFALAR LIWTRDASRI LALAVALTVG EWLRGHVLTG FPWNAFGYAL TEPLALAQTA
SLIGLWGLTF LSVAIFASPA VLIDGRSRSQ RPWIAPVTAV SLLLAMGVYG AVRLSRHPTE
FTDNVKLRIM QPNLAQDVRF NYSAKAAVMH KYLTLSDRAT GPHSTGVSSA TILIWPESAF
PFFLTREADA MAEIADLLPK GTILITGAVR APDLPPGVRI TRAYNSIYVI DDDGTILSTY
DKLHLVPFGE FLPFQGLMEK LGFVQLTKVQ GGFIPGTGRR TIALPNAPSV LPLICYEAIF
PGDIESRGGR PGWIVNLTND GWFGISTGPH QHLQQARMRA IEEGLPLVRA ANTGISVVTD
PVGRIVAQLD LGVEGVLDSR LPVAIAPTPY ARAGDIPAAI MVTIALVVVI RRRREHERRR
V