Gene Nham_0024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0024 
Symbol 
ID4029791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp24593 
End bp25717 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content68% 
IMG OID637968558 
ProductCBS:transporter-associated 
Protein accessionYP_575386 
Protein GI92115657 
COG category[R] General function prediction only 
COG ID[COG1253] Hemolysins and related proteins containing CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCTCCGG AGGAAGAACC CAGCGATATC AGGCCGCCGC AGGACAACCG CAACCTGCCG 
GTGCCGGTCC ACAACGGCGA GGTGTTGCGC CCGGCCTCCG AGCGCTGGCT GATGCGGGCG
ATCCGCTCGC TGTTCGGATG GAAGGCGGGA TCGGTCCGCG CCGACCTTCA GGTGGTGCTC
GACGCCTCGA CGCCGGACGA GACCAGCTTC ACCGCCGTCG AGCGCGCCAT GCTGCGCAAT
ATCCTCAACC TGCACGAACG ACGCATCGCC GATGTCATGG TCCACCGCGC CGATATCGTC
GCGGTCAAGC GCGACATCCC GCTCGGCGAG CTGATCAACC TGTTCGAGAG CGCGGCGCAT
TCCCGTCTCG TCGTCTACCA CGAAAACCTC GACGATCCCG AAGGCATCGT TCATATCCGC
GACCTGCTCG CGTTCATGGC CGCGAGGGCG CGCACCGCGA TGCCGTCAAA AGCGAAGCGC
AAAAAGGCGC CGCCGGCCGG CCTCGACCTG CGCGCGATCG ATCTGGCGCT GCCGCTGTGC
GAAGCCAACA TCACCCGCAA GCTGCTCTAC GTGCCGCCGT CGATGCCGGC GATCGACCTG
CTGGCGCAGA TGCAGGCGAC GCGCATCCAT CTGGCGCTCG TGGTCGATGA ATATGGCGGC
ACCGACGGCC TGGTGTCGCT CGAGGACATC GTCGAGCAGA TCGTCGGCGA AATCGACGAC
GAGCACGACG GCGACGAGCC GCCCTCCATC GTGCGCCAGG CCGACCATTC CTTCATCGCC
GATGCGCGCG CCAGCCTGGA GGACGTCCGC GCCATGATCG GCGACGAGTT CGTGATCGGT
GAAGCGGGCG AGGACGTCGA TACGCTCGGC GGCTTTCTCG TCACCCATGT CGGCCGCCTG
CCGGTGCGGG GCGAGGTCAT TTCAGGACCG GGCCCGTTCG AGATCGAAGT GCTCGATGCC
GACCCGCGCC GCGTCAAGCG GCTGCGGATC GGGTTGCGCA AGGAGCGGCC CGCCGTCCGC
CCGCGCGACG GGCGGCGGCG CGAGGCCGCG CCGGATGCGC CCTCGCAACC GCAAGGCGAC
CCGGCCTCTC CGTCATTGCC GGACGATGGA GGCGAAACCC CGTGA
 
Protein sequence
MSPEEEPSDI RPPQDNRNLP VPVHNGEVLR PASERWLMRA IRSLFGWKAG SVRADLQVVL 
DASTPDETSF TAVERAMLRN ILNLHERRIA DVMVHRADIV AVKRDIPLGE LINLFESAAH
SRLVVYHENL DDPEGIVHIR DLLAFMAARA RTAMPSKAKR KKAPPAGLDL RAIDLALPLC
EANITRKLLY VPPSMPAIDL LAQMQATRIH LALVVDEYGG TDGLVSLEDI VEQIVGEIDD
EHDGDEPPSI VRQADHSFIA DARASLEDVR AMIGDEFVIG EAGEDVDTLG GFLVTHVGRL
PVRGEVISGP GPFEIEVLDA DPRRVKRLRI GLRKERPAVR PRDGRRREAA PDAPSQPQGD
PASPSLPDDG GETP