Gene Nham_0023 details

Gene Information

• Locus tag: Nham_0023
• ID: 4029790
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 24020
• End bp: 24592
• Gene Length: 573 bp
• Protein Length: 190 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637968557
• Product: hypothetical protein
• Protein accession: YP_575385
• Protein GI: 92115656
• COG category: [R] General function prediction only
• COG ID: [COG0319] Predicted metal-dependent hydrolase
• TIGRFAM ID: [TIGR00043] metalloprotein, YbeY/UPF0054 family

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATGTCG AAAACGACCG GCCGCCGCGA CGCGGCGCTG CCGGCGAAAG AAATTCCGGA 
ACGATGATCT ACCCTGCTTT ACCTGCAACC GAAGTTCTCG TGGTCGCCGA ATGCTGGCGG 
GCGGAGGCGG GTGCCGAGGC GATCATTCAT CGCGCCGTCG AGACCGCCGC CGGGATGGTC 
GATACCGACA CCGGCGACGC CGAACTCGCG ATCATGCTGA CCGACGACGC CGGCATCCGC 
ACGCTCAACG CCAACTGGCG CGGCATCGAC AAGCCAACCA ATGTGCTATC GTTCCCGGCG 
TTGCAGCCGA CCGGCGCACC GTCGCCCGAC GATGCGCCGC GCATGCTCGG GGACATCGCG 
ATCGCCTATG AAACCCTGCG CCGCGAGGCC TGCGACGAGC ACAAGCCGTT CGATCACCAC 
CTGAGTCATC TGACCATCCA CGGGTTTCTG CATCTGATCG GTTACGACCA CGAAACCGAT 
GAAGAGGCCG GGGAAATGGA AAACCTCGAG CGCAAAATTC TGGCGCGGCT CGGCATACCC 
GACCCCTATG CGCCGCAAGA ACGGATGGCC TGA 

 

Protein sequence

MDVENDRPPR RGAAGERNSG TMIYPALPAT EVLVVAECWR AEAGAEAIIH RAVETAAGMV 
DTDTGDAELA IMLTDDAGIR TLNANWRGID KPTNVLSFPA LQPTGAPSPD DAPRMLGDIA 
IAYETLRREA CDEHKPFDHH LSHLTIHGFL HLIGYDHETD EEAGEMENLE RKILARLGIP 
DPYAPQERMA