Gene Ndas_5538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5538 
Symbol 
ID9249441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp733728 
End bp735356 
Gene Length1629 bp 
Protein Length542 aa 
Translation table11 
GC content76% 
IMG OID 
Productserine/threonine protein kinase 
Protein accessionYP_003683423 
Protein GI297564450 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTACGC ACCCCTCAGC CGTCACGCTC CCCGCGACCG CGACCGCCCT GACCTCCACC 
GACCCCGCGC GGATCGGTCC CTACCGGACC CTCGGGCGCC TGGGCTCCGG CGGTATGGGT
GTCGTGTACG CGGCCCTCGA CCGGAACGGC GCGCTCGTCG CGGTCAAGCT CATCCACCCC
GAGTACTCCG CCGACGACGA GTTCCGGGCG CGGTTCGCGC GCGAGGTGCG GCTGCTGGGC
CGGGTGGGCG GAGCCTGCGC GGTGCCGCTG CTGGCCGCCG ACACCGAGGC CGAGCGCCCC
TGGCTGGCCA CCCCGTTGGT GCGCGGGATG ACGCTCAGCG CCTACACGCG CGCGCACGGG
CCCCTGGGCG GATGGCTGCT GATCGGACTG GCCGCCGGAG TGGCCGAGGC GCTCGCCCAG
ATCCACGAGA TCGGCATCGC CCACCGCGAC CTCAAGCCCG CCAACGTCAT CCTGTCGCCC
GAGGGACCCC GTGTCCTGGA CTTCGGCGTG GCCCGCGCGA TCGACCAGAC CGCGCTGACC
CGCACCGGGT CCGTGCTGGG CTCGCCCGGC TGGATCAGCC CCGCCCACTA CCGCGGCGAA
CCCCCCAGCA CCGCCGACGA CGTCTTCGCC TGGGGTGCGC TGGTCTCCTA CGCGGCGACC
GGGCGCCCGC CGTTCGGCAC CGGCGACCCG GCGGCCGTCG CGCACCGGGT GATCAGCGGC
GAACCCGACA CCGCGGGTTT CACCGGCCCC CTCGCGGACC TGGCCGCACG CGCGCTCAGC
AAGGAGGCGT CCGAGCGGCC GACCGCGCTG GAGCTGGTCG GCGGCGTGAT CGCGGCGGGC
GACCCGAGGC GCTCCCACAC CCCGCCGGAC TCCGCCGCGG AGGCGGGCGG CGTCATGGCC
ACCGTCGTCG ACCACCAGTG GCAGGGCGTG CGGACCGCAC CCGAGCGCGA GTTCCCGGTG
GCCCCCGAGA GGCGGGGCGG AGCCGGGAGG ACGCTGACCG TCGTCGGCGC CGCCCTGGGC
GCCCTCGTCC TGCTCGCGGG ACTGGGCTTC GGCGGCGTCG CCCTGGCCGC CAACTGGGAC
TCCCTGCCCG TCGCCGCCTG GTTCGGGGAC GAGCCGACCG GGACGGCCGA GGCGCGGCAG
GCCGCCGGGG AGCAGCAGAA CCCGGAACGC GGACACCAGG AGCGGCCGGA CGGCGCCTCC
TCCGAGGAGC CCTCCGCGAG CCCCTCCGAC GAGGCGTCCC AGAGCGCTGA GGACGAGGGG
GATTCCGGCG GCGGGTCCAC CACCACGACG GCCACGGTGG GCGCCGGGGT GGGCGCGAGC
GGAACGCGCC CACCGGGCGA GCACGTCGTG GCCTTCCAGA CCCCCGGCGG TTCGGGGCAG
TACGCCGTGC TCGACGGCGC CACGGTGGTG TGCGCGTGGA GCTTCTGCCA GAGCCAGGGC
GGATCGGTCG GCGACGGCGG CGCCGGTTCG GTCGCCTCCA CCCCCTCGGC CCTGACCGGC
TACGTCAACC AGGGCAGCCG CGTCATCACC GCCGAGGTCA CCTACACCAC CGGCGCCGAC
GGCACCGTCA CCATCACCCG CCTGGTGGAG CGGCACAGCA CCAGCGGCAC GGGCACCCCG
CCGTGGTAG
 
Protein sequence
MSTHPSAVTL PATATALTST DPARIGPYRT LGRLGSGGMG VVYAALDRNG ALVAVKLIHP 
EYSADDEFRA RFAREVRLLG RVGGACAVPL LAADTEAERP WLATPLVRGM TLSAYTRAHG
PLGGWLLIGL AAGVAEALAQ IHEIGIAHRD LKPANVILSP EGPRVLDFGV ARAIDQTALT
RTGSVLGSPG WISPAHYRGE PPSTADDVFA WGALVSYAAT GRPPFGTGDP AAVAHRVISG
EPDTAGFTGP LADLAARALS KEASERPTAL ELVGGVIAAG DPRRSHTPPD SAAEAGGVMA
TVVDHQWQGV RTAPEREFPV APERRGGAGR TLTVVGAALG ALVLLAGLGF GGVALAANWD
SLPVAAWFGD EPTGTAEARQ AAGEQQNPER GHQERPDGAS SEEPSASPSD EASQSAEDEG
DSGGGSTTTT ATVGAGVGAS GTRPPGEHVV AFQTPGGSGQ YAVLDGATVV CAWSFCQSQG
GSVGDGGAGS VASTPSALTG YVNQGSRVIT AEVTYTTGAD GTVTITRLVE RHSTSGTGTP
PW