Gene Ndas_5464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5464 
Symbol 
ID9249367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp653526 
End bp654263 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content72% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003683349 
Protein GI297564376 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.230295 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCGA TCGAGATAAG GAACGTGTCC AAGACGTTCC GCGGCCAGCG GGCCGTTGAC 
CACGTCTCCT TCACGGTGGA GCCCCGCACG GTCACCGGCT TCCTGGGCCC CAACGGCGCG
GGCAAGACCA CCACCCTGCG GTGCCTGCTC GGCCTGGTCC GCCCCGACAG CGGCGAGGGG
CTGGTCAACG GCCGCGCCTA CACGAGCCTG CCCAACCCGC TGACCGAGGT CGGCGCGGTG
CTGGAGGCCA CCAACCTGCA CCCGGGGCGC ACCGGCCGCA ACCACCTGCG CGTCATGTGC
GACGCCGCGG GCCTGCCCCT CTCCCGTGCC GACGAGGTGC TGGACGAGGT CGGGATCACC
GGTGCCGGGA ACAAGCGGGT CGGCGGCTAC TCGATGGGCA TGCGCCAGCG CCTGTCACTG
GCCGGGGCGC TCCTGGGCGA TCCCCGGGTG CTGATCCTGG ACGAGCCCGC CAACGGACTG
GACCCGGAGG GCATCGAGTG GCTCCGCCGG TTCCTGCGCC GCCAGGCCCA CGACAGGGGC
GTCGCCGTCC TCGTGTCCAG CCACGTCCTG GCCGAGGTCG AACAGACCGT CGACAACGTC
GTCATCATCG CCAGGGGCCG CCTGGTCCAC CAGGGGACCC TCGGCGAACT CACCGGCAAC
GGGGAGAGCC TGCACGACGC CTTCCTCCGC CTCACCGCCT CGGGGACGGC CGCCCACCCG
CTTGGAGACC GCCAGTGA
 
Protein sequence
MPAIEIRNVS KTFRGQRAVD HVSFTVEPRT VTGFLGPNGA GKTTTLRCLL GLVRPDSGEG 
LVNGRAYTSL PNPLTEVGAV LEATNLHPGR TGRNHLRVMC DAAGLPLSRA DEVLDEVGIT
GAGNKRVGGY SMGMRQRLSL AGALLGDPRV LILDEPANGL DPEGIEWLRR FLRRQAHDRG
VAVLVSSHVL AEVEQTVDNV VIIARGRLVH QGTLGELTGN GESLHDAFLR LTASGTAAHP
LGDRQ