Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_5378 |
Symbol | |
ID | 9249281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014211 |
Strand | + |
Start bp | 559698 |
End bp | 560531 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003683264 |
Protein GI | 297564291 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGAAC CGGCCAGCAC CTCCGAGACC CCCGCCCACC CACGGACCGC GCTGGTCACC GGAGCCTCCA CCGGGATCGG CGAGGAGTAC GCCCGCAGGC TCGCCGAACG CGGCTACTCC CTCGTCCTCG TCGCCCGCCG GGGCGAGCTC CTGGAGGCCC TCGCCGAGGA GATCGGCGGA CGCTACGGGG TCGGCGTCCA GCCCCTGCCC GCCGACCTGG GCACCGACGA GGGCCTCTCG CTGGTCGTCA AACGCCTGTC CGCCGACGGC AGCGGCGACG AGGCTCCCGT GGACCTGCTC GTCAACAACG CCGGGCGGGG CGACGGCGGC CCCTTCGTCA GGCAGGAGCC CTCGGAGATC GACGCCATGC TCGACCTCAA CGTGCGCGCG GTCCTGCACC TGACCCGCGC CGTCCTGCCG GTGCAGATCG CCCGCCGCGA GGGCCTGCCG CGCCGGACCA GGCTCGGCGT CATCAACCTC TCCTCCGTCG CGGGCGAGAT CACCGCCAAC CCCGGCGGCT CGGTGTACGG GGCCGGTAAG AAGTTCGTGT CCCTGTGGAG CGAGAGCGTG GCCGCCGAGG TCGCCGAGCA CGGCGTGCAC GTCACCGCGG TCCTGCCGGG GTTCGTGCGC ACCGACATGA CCAGGGGCGT CCAGGAGAGC GGGATGCCCG CGTTCGCGTT CGTCCCCAAG GAGCAGGTCG TGCGCGAGTC CCTCACCGCC TGGGCGGCCG GGCGCTCCAG CGTCGTCGCC GGCGCCCAGT ACAAGGCGGC CACGGGGCTC CTGCGCTTCA TCCCCAAGCC GATCGTGCGC GCCGCCGCAC GCAGGGTGTG GTGA
|
Protein sequence | MSEPASTSET PAHPRTALVT GASTGIGEEY ARRLAERGYS LVLVARRGEL LEALAEEIGG RYGVGVQPLP ADLGTDEGLS LVVKRLSADG SGDEAPVDLL VNNAGRGDGG PFVRQEPSEI DAMLDLNVRA VLHLTRAVLP VQIARREGLP RRTRLGVINL SSVAGEITAN PGGSVYGAGK KFVSLWSESV AAEVAEHGVH VTAVLPGFVR TDMTRGVQES GMPAFAFVPK EQVVRESLTA WAAGRSSVVA GAQYKAATGL LRFIPKPIVR AAARRVW
|
| |