Gene Ndas_5378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5378 
Symbol 
ID9249281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp559698 
End bp560531 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content74% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003683264 
Protein GI297564291 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAC CGGCCAGCAC CTCCGAGACC CCCGCCCACC CACGGACCGC GCTGGTCACC 
GGAGCCTCCA CCGGGATCGG CGAGGAGTAC GCCCGCAGGC TCGCCGAACG CGGCTACTCC
CTCGTCCTCG TCGCCCGCCG GGGCGAGCTC CTGGAGGCCC TCGCCGAGGA GATCGGCGGA
CGCTACGGGG TCGGCGTCCA GCCCCTGCCC GCCGACCTGG GCACCGACGA GGGCCTCTCG
CTGGTCGTCA AACGCCTGTC CGCCGACGGC AGCGGCGACG AGGCTCCCGT GGACCTGCTC
GTCAACAACG CCGGGCGGGG CGACGGCGGC CCCTTCGTCA GGCAGGAGCC CTCGGAGATC
GACGCCATGC TCGACCTCAA CGTGCGCGCG GTCCTGCACC TGACCCGCGC CGTCCTGCCG
GTGCAGATCG CCCGCCGCGA GGGCCTGCCG CGCCGGACCA GGCTCGGCGT CATCAACCTC
TCCTCCGTCG CGGGCGAGAT CACCGCCAAC CCCGGCGGCT CGGTGTACGG GGCCGGTAAG
AAGTTCGTGT CCCTGTGGAG CGAGAGCGTG GCCGCCGAGG TCGCCGAGCA CGGCGTGCAC
GTCACCGCGG TCCTGCCGGG GTTCGTGCGC ACCGACATGA CCAGGGGCGT CCAGGAGAGC
GGGATGCCCG CGTTCGCGTT CGTCCCCAAG GAGCAGGTCG TGCGCGAGTC CCTCACCGCC
TGGGCGGCCG GGCGCTCCAG CGTCGTCGCC GGCGCCCAGT ACAAGGCGGC CACGGGGCTC
CTGCGCTTCA TCCCCAAGCC GATCGTGCGC GCCGCCGCAC GCAGGGTGTG GTGA
 
Protein sequence
MSEPASTSET PAHPRTALVT GASTGIGEEY ARRLAERGYS LVLVARRGEL LEALAEEIGG 
RYGVGVQPLP ADLGTDEGLS LVVKRLSADG SGDEAPVDLL VNNAGRGDGG PFVRQEPSEI
DAMLDLNVRA VLHLTRAVLP VQIARREGLP RRTRLGVINL SSVAGEITAN PGGSVYGAGK
KFVSLWSESV AAEVAEHGVH VTAVLPGFVR TDMTRGVQES GMPAFAFVPK EQVVRESLTA
WAAGRSSVVA GAQYKAATGL LRFIPKPIVR AAARRVW