Gene Ndas_5319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5319 
Symbol 
ID9249219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp485227 
End bp485775 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content71% 
IMG OID 
Productputative anti-sigma regulatory factor, serine/threonine protein kinase 
Protein accessionYP_003683205 
Protein GI297564232 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.238765 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCA TCACGCTCAC GATCAGCGCG CTCCCCGCTC ACGTGCGCAC GGCGCGGCTC 
ATGGCCGCCA CCGTCGCACG GCGGGCGGGT ATCGCCGCCT CAGCGATCGA CGAGATCAGG
CTGGCGGTCG GTGAGGCGTG TTCCCGGGCG GTGGCGGCGC ACAAGCTGCA CTGCCCCACA
CAGCCGATCC TGCTCCAGTT GATCGACGGC AGCGGGCCTG ATCCGGCGTC GGAGTCCCGC
ACCGACGCCA CGAGCAGCAT CCTGCGCGCC AACGGGAGCG CGACGCAACG TTTCGAGGTC
GTCGTCTCCG ACCGTGCCCC GGCCAAGGAC ACGGAGGAGC CCGCCAACCC GTCCCTGCTC
GACGGGCTCT TCCTGGACGG TGAGGACACC CCTCCCGGCG GGATCTCCGG GTTCTCCCCG
GGGCTGGGCC TGGCGGTCAT CACGGGTCTG GCCGACGAGG TGAAGATCGA CCCCAGCGAC
CGGGGGACCG TGGTGCGGAT GAGCTGGCCG CTGGCCACGG AGCACTCGCC CGACCCGAGT
TCCAACTAG
 
Protein sequence
MATITLTISA LPAHVRTARL MAATVARRAG IAASAIDEIR LAVGEACSRA VAAHKLHCPT 
QPILLQLIDG SGPDPASESR TDATSSILRA NGSATQRFEV VVSDRAPAKD TEEPANPSLL
DGLFLDGEDT PPGGISGFSP GLGLAVITGL ADEVKIDPSD RGTVVRMSWP LATEHSPDPS
SN