Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_5319 |
Symbol | |
ID | 9249219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014211 |
Strand | - |
Start bp | 485227 |
End bp | 485775 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | putative anti-sigma regulatory factor, serine/threonine protein kinase |
Protein accession | YP_003683205 |
Protein GI | 297564232 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.238765 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAACCA TCACGCTCAC GATCAGCGCG CTCCCCGCTC ACGTGCGCAC GGCGCGGCTC ATGGCCGCCA CCGTCGCACG GCGGGCGGGT ATCGCCGCCT CAGCGATCGA CGAGATCAGG CTGGCGGTCG GTGAGGCGTG TTCCCGGGCG GTGGCGGCGC ACAAGCTGCA CTGCCCCACA CAGCCGATCC TGCTCCAGTT GATCGACGGC AGCGGGCCTG ATCCGGCGTC GGAGTCCCGC ACCGACGCCA CGAGCAGCAT CCTGCGCGCC AACGGGAGCG CGACGCAACG TTTCGAGGTC GTCGTCTCCG ACCGTGCCCC GGCCAAGGAC ACGGAGGAGC CCGCCAACCC GTCCCTGCTC GACGGGCTCT TCCTGGACGG TGAGGACACC CCTCCCGGCG GGATCTCCGG GTTCTCCCCG GGGCTGGGCC TGGCGGTCAT CACGGGTCTG GCCGACGAGG TGAAGATCGA CCCCAGCGAC CGGGGGACCG TGGTGCGGAT GAGCTGGCCG CTGGCCACGG AGCACTCGCC CGACCCGAGT TCCAACTAG
|
Protein sequence | MATITLTISA LPAHVRTARL MAATVARRAG IAASAIDEIR LAVGEACSRA VAAHKLHCPT QPILLQLIDG SGPDPASESR TDATSSILRA NGSATQRFEV VVSDRAPAKD TEEPANPSLL DGLFLDGEDT PPGGISGFSP GLGLAVITGL ADEVKIDPSD RGTVVRMSWP LATEHSPDPS SN
|
| |