| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_5235 |
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| Symbol | |
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| ID | 9249128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014211 |
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| Strand | + |
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| Start bp | 388004 |
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| End bp | 390349 |
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| Gene Length | 2346 bp |
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| Protein Length | 781 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | ATP-dependent DNA helicase PcrA |
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| Protein accession | YP_003683121 |
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| Protein GI | 297564148 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00141788 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTCCTCCC AAGAACAGCT TCTCGAAGGT CTGAACGGTC CCCAGCGCGA CGCCGTCACC
CACAGCGGCT CCCCGCTCCT GATCGTGGCG GGTGCCGGGT CCGGCAAGAC CCGGGTCCTC
ACCCACCGCA TCGCCCACCT CATGGCCGCG CGCGGTGTCC GCCCGGGTGA GATCCTCGCC
ATCACCTTCA CCAACAAGGC CGCCGCCGAG ATGCGCGAGC GCATCCAGGC GCTGCTGGGC
GTGCGCGCCG CCAACAGCAT GTGGACCATG ACCTTCCACT CCGCGTGCGT GCGCATCCTG
CGCAGGGAGG CAGCCAGGCT CGGCTACCCG AGCAGCTTCA CCATCTACGA CTCCGCCGAC
TCCGCGCGCC TGATGCAGCT GGTGTGCAAG GAGATGGACC TGGACCCCAA GCGGTTCCCG
CCCAAGTCCT TCTCCGCCCA GGTCTCCAAC CTCAAGAACG AGCTGGTCGA CTACGACACG
TTCGCCGGAC AGGCCCAGAC CGAGCAGGAG AAGAAGCTCG CCGAGGCCTA CCAGCTCTAC
CAGCGCCGCC TGCACGAGGC GGGCGCGATG GACTTCGACG ACCTGATCAT GGTCACCGTC
AACCTGTTCC AGATGTTCCC GGACGTCGCC GAGTACTACC GGCGCCGCTT CCGGCACGTC
ATGGTCGACG AGTACCAGGA CACCAACCAC GCCCAGTACG TGTTCATCCG CGAACTGGTC
GGCGTGGCCG AGGGCTCCGA CACCAGCGTG GTGCCGCCCG CTGAGCTGTG CGTGGTCGGC
GACGCCGACC AGTCCATCTA CGCGTTCCGC GGCGCCACCA TCCGCAACAT CCTGGAGTTC
GAGCGCGACT TCCCCGACGC GCGCACCATC CTCCTGGAGC AGAACTACCG CTCCACCCAG
ACCATCCTGT CCGCGGCCAA CGCGGTCATC GACCGCAACG AGGGCCGCCC GGCCAAGAAC
CTGTGGTCGG AGCAGGGCGA CGGACCGGCC ATCGTCGGCT ACGTCGCCGA CAACGAGCAC
GACGAGGCCG CCTTCGTGGT CGGCGAGATC GACAAGCTCA CCGACGACGG AACCCTCACC
CCGAGCCAGG TCGCGGTGTT CTACCGGACC AACGCCCAGT CCCGCGTGTT CGAGGACGTG
TTCATCCGCA CCGGGCTGCC CTACAAGATC GTCGGCGGCG TGCGCTTCTA CGAGCGCAAG
GAGATCCGCG ACGTCCTCGC CTACCTGCGG GTCCTGGCCA ATCCCGAGGA CACCGTCAGC
CTGCGGCGCA TCCTCAACGT GCCCAAGCGG GGGATCGGCG CCCGCGCGGA GGAGTCGATC
GAGCTGTTCG CCGCCCGCGA GCGCATCTCC TTCTCCCGGG CGCTGCGCCG GGTGGAGGAG
ATCCCCGGGA TGGCCGCCCG CTCGGTCAAG GCGGTGCTCA ACTTCACCGC CCTGCTGGAG
GAGCTGGAGC AGACCGTGCC CGAGGGCACG CCCGCGGAGA TCGTCGAGGC GGTGCTGAGC
AAGACCGGGT ACCTGTCCGA ACTGGCCGAG TCCAAGGACC TCCAGGACGA GAGCCGGGTG
GAGAACCTGG AGGAGTTCGT CGACGTCGCC CGCGAGTTCG AGCACACCTT CGCCGCCCTC
CTGGAGGAGG AGCCCACGGA GGACGGGGAG GAGGCCGCCG GGGCCGTCGA TCCGGGGGCG
CCGACCCTGG TCGACTTCCT GGAGCGGATC TCCCTGGTCG CCGACACCGA CCAGATCCCC
GACGAGGACG ACGAGGGCGG CGTGGTCACG CTGATGACCC TGCACGCGGC CAAGGGGCTG
GAGTTCCCCG CGGTCTTCCT CACCGGGATG GAGGACGGGG TGTTCCCGCA CACCCGCACG
CTCGGCGACA AGACGCAGCT GGAGGAGGAG CGCCGTCTGG CCTACGTGGG CCTGACCCGC
GCGCAGCGCC TGCTGTACGT CAGCCGCGCC GCCGTGCGCA GCGCCTGGGG GACCCCCTCC
TACAACCCCG CCTCCCGCTT CCTGGACGAG ATCCCCTCGT CCCTGGTCGA CTGGCGCCGC
GCCGAGTCCA CCCTGGCCGC CCCGCCCAGC CGCAGCATCG GCGGCCGGGG CTCCGGGGGC
TTCGGCGGCG GGGGCGGTTT CAGCGGCACC TTCGGCGGCG GCTCACGGTC GCGCGGGGGA
GCGAAGGCGG CCAAGGAGGC GCCCGCGCTC AGTGTGGGGG ACCTGGTCAA CCACGACTCC
TTCGGCATGG GCCGGGTGCA GCTGGTGGAG GGGACCGGGG ACAGGACCAA GGCCCGCATC
GACTTCGGCG CGGACATCGG CGAGAAGGAC TTCCTGGTCA AGTACGCGCC GATCGAGAAG
CTCTGA
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| Protein sequence | MSSQEQLLEG LNGPQRDAVT HSGSPLLIVA GAGSGKTRVL THRIAHLMAA RGVRPGEILA
ITFTNKAAAE MRERIQALLG VRAANSMWTM TFHSACVRIL RREAARLGYP SSFTIYDSAD
SARLMQLVCK EMDLDPKRFP PKSFSAQVSN LKNELVDYDT FAGQAQTEQE KKLAEAYQLY
QRRLHEAGAM DFDDLIMVTV NLFQMFPDVA EYYRRRFRHV MVDEYQDTNH AQYVFIRELV
GVAEGSDTSV VPPAELCVVG DADQSIYAFR GATIRNILEF ERDFPDARTI LLEQNYRSTQ
TILSAANAVI DRNEGRPAKN LWSEQGDGPA IVGYVADNEH DEAAFVVGEI DKLTDDGTLT
PSQVAVFYRT NAQSRVFEDV FIRTGLPYKI VGGVRFYERK EIRDVLAYLR VLANPEDTVS
LRRILNVPKR GIGARAEESI ELFAARERIS FSRALRRVEE IPGMAARSVK AVLNFTALLE
ELEQTVPEGT PAEIVEAVLS KTGYLSELAE SKDLQDESRV ENLEEFVDVA REFEHTFAAL
LEEEPTEDGE EAAGAVDPGA PTLVDFLERI SLVADTDQIP DEDDEGGVVT LMTLHAAKGL
EFPAVFLTGM EDGVFPHTRT LGDKTQLEEE RRLAYVGLTR AQRLLYVSRA AVRSAWGTPS
YNPASRFLDE IPSSLVDWRR AESTLAAPPS RSIGGRGSGG FGGGGGFSGT FGGGSRSRGG
AKAAKEAPAL SVGDLVNHDS FGMGRVQLVE GTGDRTKARI DFGADIGEKD FLVKYAPIEK
L
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