Gene Ndas_5219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5219 
Symbol 
ID9249112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand+ 
Start bp369856 
End bp370788 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content68% 
IMG OID 
ProductAbortive infection protein 
Protein accessionYP_003683105 
Protein GI297564132 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.297366 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCGAA GATGGGGGCT CGTCTGGGGG GTGCTGGCCG CCCTGGTGTT CGTCGCGGTG 
CCGATGCTCG CCCACCCCGT ACTGCGCTCC GACATCCTCG ACGACTCCCT GGTCCTCTTC 
CTGATCTCCT GGTCCCCGAT GCTGATCGGC GGCATCCTGG CCTGGGCCAT GGTCAGGGGC 
TTCGGCGCCC GCGACCAGCT GGACCGCCGC GTCGTCCAGG CGATGGACGG CCACCCCATC 
GGCCGGGAAC TGGGCTGGCT GGGACTGTTC CTCGCCGGCT TCGTGGTGTC CATGGCACTG 
CTGTCGATGG TCTTCGCCAC CTACGAGGCC GTGTTCGGGG CCGACCTGGC CATGTCCGAG 
GCCCTGGTCT CGCGCCTGCT GTTCCTGTTC ACCCTGCCGT TGCTGGTCAT GGACCGCTCC 
GGCATCACCC TGGACGGCAA GGGCACCGCC ATGCCCGCGG TCGCGCTGAA GGTGTCCGAG 
CCCTGGCGCT GGCTCGGGAT GGTCCCGATC GCCATCGCGC TGGTCCTGAT CGGCTACCTG 
CTCATCCCGC GCCTGGGGCT GCCGGGGCCC TCCCTCCAAC TGCTGGGCTA CGTGCTCGCG 
TTCACCGTCA TGGCGGTGTG CGAGGAGATC TTCTTCCGGG GGATGGTGCA GACCCGCCTG 
GAGATCCTCA TGGGCCGCTG GGGCGGCATC GTCACCACCT CGGTGGTCTT CGCCCTCACC 
TACGCCCTCA TCCAGCCCTA CGACGCGGTG TCCCAGCTGC CGGGGGCCGA CCTGGTGTAC 
AACACCGGCC TGGCCCTGCT CACCTACGCC ACGGCCAGCC TCCTCTACGG CTACCTGTGG 
ACGTGCTTCC GCAACACGTG GATCCAGGTG GTGATGCGTG TCGGCATGTT CCTGATGCTC 
ATGCCCCCCG ATCTCCAGAC CGGCGTCATG TGA
 
Protein sequence
MVRRWGLVWG VLAALVFVAV PMLAHPVLRS DILDDSLVLF LISWSPMLIG GILAWAMVRG 
FGARDQLDRR VVQAMDGHPI GRELGWLGLF LAGFVVSMAL LSMVFATYEA VFGADLAMSE 
ALVSRLLFLF TLPLLVMDRS GITLDGKGTA MPAVALKVSE PWRWLGMVPI AIALVLIGYL 
LIPRLGLPGP SLQLLGYVLA FTVMAVCEEI FFRGMVQTRL EILMGRWGGI VTTSVVFALT 
YALIQPYDAV SQLPGADLVY NTGLALLTYA TASLLYGYLW TCFRNTWIQV VMRVGMFLML 
MPPDLQTGVM