Gene Ndas_5163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5163 
Symbol 
ID9249056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp303199 
End bp303972 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content71% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003683049 
Protein GI297564076 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.721085 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTCA ACGCAATCTC CGCCCTCGTC TCGGGCGGCG CGAGTGGCCT GGGTGAGGCC 
ACCGCCAGGG AGCTCGCCTC CGCGGGCGCG ACCGTCGTCG TCGCCGACCT CAACGCCGAG
CGCGGGGAGG CCGTCGCCAA GGAGATCGGC GGTGTCTTCG TGCGCACCGA CGTCTCCCAG
GAGGACCAGG TCAAGGCCGC GGTCCAGGCC GCCGTCGACA CCGGCAAACC CTTCCGGGTG
GCCGTGTCCT GCGCGGGCAT CGGCTGGGCC ACCCGCACCG TCGACCGCAG TGGAAACCCC
CACGACCTGG ACAGCTACCA GAAGGTCATC CAGGTCAACC TCATCGGCAC CTTCAACGTG
CTGCGCCTGG CCGCGGCCGA GATCGCCAAG ACGGAGCCGG TCAACGAGGA CGGCGAACGC
GGCTCCATCG TCAACACCGC CTCCCTCGCC GGCATCGAGG GCCAGATCGG CCAGATCGCC
TACTCCTCCT CCAAGGGCGG CGTCATCGGC ATGACCCTCC CGGCCGCCCG CGACCTCGCG
GCCGTCGGCA TCACCGTCAA CACCATCGCC CCCGGCATCC TGGAGACGCC CATCTACGGC
GAGGGCGAGG CCGCCGAGGA GTTCAAGCGG CGCCTGGCCG CGCCGGTTCC CTTCCCCAAG
CGCCTGGGCA CCGCCGAGGA GTTCGGCCGG CTCGCCCGGG CCCTGCTGGA GATCAGCTAC
GTCAACGGCG AGGTCGTCCG CATCGACGGC GCGCTGCGCA TGCCGCCGAA GTAG
 
Protein sequence
MDLNAISALV SGGASGLGEA TARELASAGA TVVVADLNAE RGEAVAKEIG GVFVRTDVSQ 
EDQVKAAVQA AVDTGKPFRV AVSCAGIGWA TRTVDRSGNP HDLDSYQKVI QVNLIGTFNV
LRLAAAEIAK TEPVNEDGER GSIVNTASLA GIEGQIGQIA YSSSKGGVIG MTLPAARDLA
AVGITVNTIA PGILETPIYG EGEAAEEFKR RLAAPVPFPK RLGTAEEFGR LARALLEISY
VNGEVVRIDG ALRMPPK