Gene Ndas_5048 details

Gene Information

• Locus tag: Ndas_5048
• ID: 9248937
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111
• Kingdom: Bacteria
• Replicon accession: NC_014211
• Strand: -
• Start bp: 186980
• End bp: 190039
• Gene Length: 3060 bp
• Protein Length: 1019 aa
• Translation table: 11
• GC content: 69%
• Product: hypothetical protein
• Protein accession: YP_003682935
• Protein GI: 297563962

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.114133
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 17
• Fosmid unclonability p-value: 0.746585
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGACCGAGA TGTGCACGCC CACGGGCGGC CTGATCAACC CCGCGGCCTT CCCCATTCCG 
ACCGCCAGTC CCGCCACCCT GGAGAGACAG GCGCGGGACC TGCGCCGGGA GGGGGCCAAC 
GTGGCAGGAA TCGGCGGCGA CATCAAGAGC GCCTGGGCGG GGCTGTCCAC GTGCTACTCC 
GCGCCCGAGG CCGAGACCCT GTACGCGGTG GTGGACCCGG TCGCGACCGA CGGCGACAAG 
GTGGAGACCT CCTTCGACAA GGCCGCGAGC GCGCTGGAGA CCTTCGCCGA GGCCGTCCGG 
GACATCAAGG GCAAGTGGTC CACGCTCAAG AGCGACTCCT ACACCTTCCT CAACTCCATC 
GAGGGCGACG ACGACTGGCG CGAGGCCGAC GGGTTCGTCG ACAGCCTCCT GGGGCGCGAG 
AGCGAGAAGG TCGGGGAGCA CCAGGCGCTG CTCGACCGCG CGGACGCGCT GCGGCGCGAG 
TACGAGGAGG CCGAGCGGGC CTGCGCCAAC GCGATCAACG CCGACATCCC CGACCGCACC 
AACTTCGTCG CGGGCGACGG CGACGGGGAG TCCGCGCCGG GCGAGTTCGA GCACGGCTAC 
GACGGGTACC TCGGCGACGT GGCCATGGCC TGGGGCGGTC CCATGGAGAC CGACCACGGC 
TGGTGGGTGG ACGCGGGTGC GGCGGTGGGC GACTTCTTCG TGGGGATCGC GGAGGACGTC 
GGCGGCATCA CCGGGATGTA CAGCTCCGAG GGCTGGTTCG AGATGTCCTG GGGCGACGCC 
ATGTGGGAGT ACCACGAGGG CAACCTCCAG TCCCTGGCGT CACTGGCGGG CATGTACGAC 
TCCGAGAGCG ACAGCTGGGG CTGGTCGGGC TGGGACACCG TCGGCAACGC CTGGAAGGAC 
GCCGCGCACG CGGTGGTGCC CTGGGAGGAG TGGAGCGAGC GGCCCGGCTA CGTCATCGGG 
ACCGCCCTGC TCAACATCGG CGCGACCGTG GGCGGCGCCG CCCTGACCGC GACCGGCGTG 
GGCGCGGTCG TGGGCGTGCC GCTGATGGCC TGGCGCGGTT CGGCCATGCT CAACAGGATG 
GGCGGGGACG GGCCGAGCGT CCCCGACGTG GACGTGCCGG ACATGAGCCG GATCAACCTG 
AGCCTGCCCC GGTTCGGCAA CGTCTCCCTG GCGGATCTCA GGATCGACCT GGGCCAGCTC 
CGGGAGGGCG CCTTCAGCAC CTCCCGGCTG TCGGAGATGC AGAACCTGCT GAGCAGGTTC 
ACCGGCGGGG GCTTCTTCGG CGGCGGGGAC GACCCGGGCG GCAACGGTTC CGGTGGGGAC 
GGGAACGGCT CCGAGGGCTC CGACAGCCAG CGCGTCGCCA ACCACCACGG CGACGAGGAG 
GGCGGCCCGG CCGACACCCG GCCCGCCGTG AACCCGACCA CGCGTGAACT CGACGACAGC 
CGGGAGCTCC TGGAGCTGCT GACTTCGCAT CCGGACTCCG CCGAGCTGGG CGACCTCGGG 
CGCAGGGTCC TCGGTGGGGA GGGAGGCGAC AGCGACGCCC CCCGGCCGAA CCGTTCCGGG 
CAGCCCGACC TGGAGGAGCT GGGCCTGGAC CCGTCCCTGG AGGCGGTGTT CAGCGACATG 
AACGCGCACG CCTCGGACTA CCCGGCGTGG GAGGCCAACC AGTCCCCGGA CGGCCCGGAG 
TCGGGGAGGG TTCCCGCCCT CGTCGGCGGC GGGAACAACG ACACGTTCGA GGGCAGCCAG 
GACGTCTCCA ACCCGCCGTC GTACGACCGG GTGGACCTGA CCGGCACCGG CGGCGACGGT 
CCCCAGCGCT TCCCGGACGA CCACCGCGAC GCGGACTTCG GCGACGACGG CCCGCAGATG 
CGGGACCGCA CGCCCCTGGT CACCAACAGC ACCGGCGGCA ACGGCAGTGA CACGCTGGAC 
ACCGGGGGGA ACTCCCGTGG CGGCACGGAC GTCCTGGACG GGTCCGGCGA CGGCGGTGGC 
AACACGCACA GCGCGGGCGG CAACGGACGG GGCCCCGGCG ACACGCGGCC GGGCAGCGCC 
GGAGGCGACA TCCTCGGCGG CCGGGGCGGC CAGAACGACG GCCCGGAGAA CACCCCGATC 
AGGAACCAGC CCGACCTGCG ACCGGAGAGC ACCGACCCCG GGGTCCGGGA ACTCCTCCCC 
AGGGACGGCC TGCGCTTCGG CGAGATCAGG GACGACAACG GCAATGTCAG CAACCGCATT 
CTGGAGCCGA ACAGCAGGTA CAGGCTCTAC GAACCGGGCA GCGACCTCCA CACGGACTAC 
GTCACCGACG CCGATGGGAA CATCAGGGAG ATCCGGACCG AGTCCAAGGG CTGGAACTCC 
GAGCATCCGG AGTACCTCAA CCCCAGGCCG GACATGACCT TCAACGTGGA CGGCTACACC 
TACAGGACCG ACGAGTACGG CCGGACGGTC TCCGTCGAGG GAACGCTGCA CAAGGAACCG 
AACGTCCGCA ACGAAAACGA ACAGTCCAAG GTCAACAGCC AGGGCTCGGA CTACTACGAA 
CAGCTGAACC AGAAGATCCG CGATGACTTC GAAACGGCGA ACGGCCGTCC GCCGGAAGCG 
GGTGAGGTCC CCCAGTACCA GGACATCCAG TGGGACGGCG GCCACCTGAT CGGGTACGCG 
GAGTTCTTCG GTATCGGCGA GCGCCTGAAC ATGGTCCCGA TGCGGTTCGA CGTGAACCAG 
AACAGGACCG AGACCGCTCT GGATGACATC CCCGAAGAAG TACGGGGCGG CATCGAGGGA 
AGTTACCGGA ACATCGAGCG CTCCTGGCGT GGAATCATGC GCGACAAGGG CTCCTGGCAT 
GGATTCACCA ACCCCAAATT CAATGACGGG AGCTGGGACG CCGCCCTCGC ACTGAATCCG 
AATAACCCCA AGATCGACGT TAAGATCACT AACATCTACG ACCCCAGCCT GCCACCGGTG 
TACGACAAGT CCGGAAACCG TCACTTGCCA CCGCCGAGCA GGATTGAGGT CGAATGGGTC 
CTCAACGGGG TTAGAATGGA AAACCGAGAG TACAACAACG TACCACCCCT CGTGGACTAG 

 

Protein sequence

MTEMCTPTGG LINPAAFPIP TASPATLERQ ARDLRREGAN VAGIGGDIKS AWAGLSTCYS 
APEAETLYAV VDPVATDGDK VETSFDKAAS ALETFAEAVR DIKGKWSTLK SDSYTFLNSI 
EGDDDWREAD GFVDSLLGRE SEKVGEHQAL LDRADALRRE YEEAERACAN AINADIPDRT 
NFVAGDGDGE SAPGEFEHGY DGYLGDVAMA WGGPMETDHG WWVDAGAAVG DFFVGIAEDV 
GGITGMYSSE GWFEMSWGDA MWEYHEGNLQ SLASLAGMYD SESDSWGWSG WDTVGNAWKD 
AAHAVVPWEE WSERPGYVIG TALLNIGATV GGAALTATGV GAVVGVPLMA WRGSAMLNRM 
GGDGPSVPDV DVPDMSRINL SLPRFGNVSL ADLRIDLGQL REGAFSTSRL SEMQNLLSRF 
TGGGFFGGGD DPGGNGSGGD GNGSEGSDSQ RVANHHGDEE GGPADTRPAV NPTTRELDDS 
RELLELLTSH PDSAELGDLG RRVLGGEGGD SDAPRPNRSG QPDLEELGLD PSLEAVFSDM 
NAHASDYPAW EANQSPDGPE SGRVPALVGG GNNDTFEGSQ DVSNPPSYDR VDLTGTGGDG 
PQRFPDDHRD ADFGDDGPQM RDRTPLVTNS TGGNGSDTLD TGGNSRGGTD VLDGSGDGGG 
NTHSAGGNGR GPGDTRPGSA GGDILGGRGG QNDGPENTPI RNQPDLRPES TDPGVRELLP 
RDGLRFGEIR DDNGNVSNRI LEPNSRYRLY EPGSDLHTDY VTDADGNIRE IRTESKGWNS 
EHPEYLNPRP DMTFNVDGYT YRTDEYGRTV SVEGTLHKEP NVRNENEQSK VNSQGSDYYE 
QLNQKIRDDF ETANGRPPEA GEVPQYQDIQ WDGGHLIGYA EFFGIGERLN MVPMRFDVNQ 
NRTETALDDI PEEVRGGIEG SYRNIERSWR GIMRDKGSWH GFTNPKFNDG SWDAALALNP 
NNPKIDVKIT NIYDPSLPPV YDKSGNRHLP PPSRIEVEWV LNGVRMENRE YNNVPPLVD