Gene Ndas_5041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5041 
Symbol 
ID9248930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp182167 
End bp182760 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content71% 
IMG OID 
Productputative anti-sigma regulatory factor, serine/threonine protein kinase 
Protein accessionYP_003682928 
Protein GI297563955 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.486269 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCGTA TCAATCCTGG TAAAAGCGGT ACTAATCGTC ATTCCGACCC GTTGCCGCGG 
CGGGTCACCG ACTCCGAAGC ACGGGCGCCG ATCGTGCTGG GTCGGATATC GCAGCATCAC
CCGAACCACG CGCTGAAACT GCCGGGGGTG CCCGACCAGG CGCGAGTGCT GCGCAGGCGT
CTGGGCGCGG TGCTGCCGGA CGCACTCACG GACACGGCCC TGGCCCTGGC CAGTGAACTG
TTCAACAACG CCCTCGCCCA CTCGCGCAGC GGTGAGGCGG GCGGAGAGGT CACCGTGATC
GTGAACCGGT TCCCCGGCCG GGTCCAGATC AAGGTCATCG ACCAGGGCCC GCACGACGCG
CACGCCCCCT CGCCGCACCT GCGCCCGGTC GTGCCGGTCC GTGGGGGAGG GACGGGCGGG
GCGCGCGGTG CGGGTGGGAC AGGTGGCGGT GAGGGGGAGA TCAGTGGCGG CGTGGGCGGG
TGGGGCCTGC GCATGGTGGC CGCGGAGTCC AGCCGGTGGG GAACCCTCCA CGAAGGGGGC
CGCACCACGG TGTGGTTCGA GCTGGACCGG CCGCGCACGC GCCCGCTGAA GTGA
 
Protein sequence
MIRINPGKSG TNRHSDPLPR RVTDSEARAP IVLGRISQHH PNHALKLPGV PDQARVLRRR 
LGAVLPDALT DTALALASEL FNNALAHSRS GEAGGEVTVI VNRFPGRVQI KVIDQGPHDA
HAPSPHLRPV VPVRGGGTGG ARGAGGTGGG EGEISGGVGG WGLRMVAAES SRWGTLHEGG
RTTVWFELDR PRTRPLK