Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_5036 |
Symbol | |
ID | 9248925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014211 |
Strand | - |
Start bp | 178206 |
End bp | 179093 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003682923 |
Protein GI | 297563950 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.500062 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGGCC AGATCGAGCT GGCGGATCAC TTCGAACGCT CCCGTAGACA TCTGCGCGGA GTCGCCTTCC GCATGCTCGG GTCGGCCGCC GAGGCGGACG ACGCCCTCCA GGAGACGTGG ATCCGGGCGT GCCGGGGGGA CTTCGGCGAG GTCTCCAACA TGACGGGGTG GCTGACCACG ATCGTCGGAC GCGTCTGCCT CGACATGCTG CGCTCGCGCA AGAGCCGCCG CGAGGAGTTC ATGGACGTCA GCGACATCGA GCCGCTGCTC GCCCACGACC GGGGCCCGGA CCCCGAGGGC GAGGCGGTGC TGGCCGACTC CGTGGGCCTG GCCCTGCTCG TCGTGCTGGA CAGGCTCAGC CCCGCCGAGC GCGTCGCCTT CGTCCTGCAC GACCTGTTCG CCGTCCCCTT CGCCGAGATC GCCGAGATCG TCGAGCGCAC CCCGACCGCG GCCAAGAAGA TGGCGAGCCG GGCGCGGCAG AGGGTGCAGG GCACCACGAG CGTCCCCGAA CCGGACCTCA CACGGCGGCG CGAGGTCGTG GACGCCTTCC TCGACGCCTC GCGCGCGGGA GACCTGGACG GCCTGCTGAA GGTCCTGGCC CCCGACGTCG TGCGGCGGGC GGACCCGCAG GCCCTCCGGC TGCGCGAGCC CGCGGTGCTG CGCGGTGCGC GCCAGGTCGC CGGGGAGACC GCCAACAACG TCCGCAGGAC CCGCTTCGCC CGTCCCGCGC TCGTCAACGG CATGCCCGGG GCCGTCGTCG CCCCCGGCGG TCGGCTCCTG TTCGTGCTGG AGATCACCGT CCGCGACGAC CGCGTCAGCG GGATCGAGAT CATCGGCGCC CCGGAACGCC TGCGGGAGCT GGAGATCTCC GTGGCCGACC CGGCGTAG
|
Protein sequence | MNGQIELADH FERSRRHLRG VAFRMLGSAA EADDALQETW IRACRGDFGE VSNMTGWLTT IVGRVCLDML RSRKSRREEF MDVSDIEPLL AHDRGPDPEG EAVLADSVGL ALLVVLDRLS PAERVAFVLH DLFAVPFAEI AEIVERTPTA AKKMASRARQ RVQGTTSVPE PDLTRRREVV DAFLDASRAG DLDGLLKVLA PDVVRRADPQ ALRLREPAVL RGARQVAGET ANNVRRTRFA RPALVNGMPG AVVAPGGRLL FVLEITVRDD RVSGIEIIGA PERLRELEIS VADPA
|
| |