| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_4976 |
|---|
| Symbol | |
|---|
| ID | 9248865 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014211 |
|---|
| Strand | + |
|---|
| Start bp | 116617 |
|---|
| End bp | 117063 |
|---|
| Gene Length | 447 bp |
|---|
| Protein Length | 148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | membrane-flanked domain protein |
|---|
| Protein accession | YP_003682864 |
|---|
| Protein GI | 297563891 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0726163 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCGCCCG CCCTGGCCTG GTACCGCCGG ATCGTGGTGG GCACGCTGTG CCTGCTCGCC
GGGGGCGGGG GCGCCGTGCT GCTGCTCGTG CGGGCCTCCT GGCCCTGGGC CGCCGCCTGG
GCGGTTCTGG CCGCGGCGGT CCTGGCCGCG GGCTGGGTCC TGGCCGGGCT CTTCCGCCGG
TCGTGGGGCT ACGCGGAGGC CGATGAGGAG CTCTACCTCA CCTACGGGGT GTTCGTGAGG
CAGTTGGTGG TCATCCCCTA CGGCCGGATG CAGGTCGTGG ACGTCACCGC CGACCTCCTC
GAACAGGCCC TGGGCATCGC CACCGTGCAG GTGCGCACCG CCGCCAGCAC CGCGGACACC
CGGGTGGTCG GGCTGCCGCT GGCCGAGGCC GTCCGGATGC GCGACCGGCT CGCGGCGCGC
AGTGAGAGCT TCTCGACGGG GTTGTAA
|
|---|
| Protein sequence | MSPALAWYRR IVVGTLCLLA GGGGAVLLLV RASWPWAAAW AVLAAAVLAA GWVLAGLFRR
SWGYAEADEE LYLTYGVFVR QLVVIPYGRM QVVDVTADLL EQALGIATVQ VRTAASTADT
RVVGLPLAEA VRMRDRLAAR SESFSTGL
|
|---|
| |