Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_4905 |
Symbol | |
ID | 9248792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014211 |
Strand | - |
Start bp | 34964 |
End bp | 35833 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | transcriptional regulator, DeoR family |
Protein accession | YP_003682794 |
Protein GI | 297563821 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.23552 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGACACCGG AGGGGAACCT GGAACACTGG ATCCAACACA TTCCCACATT TTCGATCATG CCTGGGGGGC GGATGCTGGC TGCGCAACGG CAGGAGCTGA TCCTCGAACA GGTGCGGCGC AGCGGGGCGG TGCGGGTGGC CGACCTGGTC GAGAGCCTCT CGGTGTCGGA CATGACCGTG CGCCGCGACC TCGACGCCCT GGAGAGCCGG GGCGAGGTGC GCAAGGTGCA CGGCGGGGCC GTGGCACCGG AGGGCGCGCG CACCGAGGAG CCCGGTTTCG AGGCCAAGTC CACCCGTCAG GAGGACGAGA AGCACGCCAT CGCGCGGGCC GTGGCCGAGC TGGTCGAGCC GCACAGCGCC GTGGGCCTGT CCGCGGGCAC CACGACCGCC ACCGTCGCCG AGTACCTCAC CGACACGCCG GGGCTGACGG TCGTCACCAA CTCGCTGCGC GTGGCCGAGG TGTTCCACCG GGCCGCGCGG CCCGACCAGA CCGTGGCGCT CACCGGCGGC TTCCGCACGC CCTCCGACGC GCTCGTGGGC CCGCTCGCGC TCGCCTCCGT GCGCGGCCTC AACCTGGACG TCCTCGTCCT GGGCGTGCAC GGCATGCAGG AGCGCGCCGG GTTCACCACG CCCAACCTCA TGGAGTCCGA GACCAACCGC GCCCTGGTGG AGGCCGCCGC CTCCCTCGTG GTCGCCGCCG ACCACAGCAA GTGGGGCACG GTCGGGATCA GCACCATCGC GCCGCTGGAC CGCTGCGACG TGCTGGTCAC CGACTCCGGA ACCGACCCGG CCGTCCGGGC CGCGCTGACC GAGCACGTGG GCCGCCTGGT GGTCGCCGAC GTGCGACCGA GGAAGAGGGA GGACGGATGA
|
Protein sequence | MTPEGNLEHW IQHIPTFSIM PGGRMLAAQR QELILEQVRR SGAVRVADLV ESLSVSDMTV RRDLDALESR GEVRKVHGGA VAPEGARTEE PGFEAKSTRQ EDEKHAIARA VAELVEPHSA VGLSAGTTTA TVAEYLTDTP GLTVVTNSLR VAEVFHRAAR PDQTVALTGG FRTPSDALVG PLALASVRGL NLDVLVLGVH GMQERAGFTT PNLMESETNR ALVEAAASLV VAADHSKWGT VGISTIAPLD RCDVLVTDSG TDPAVRAALT EHVGRLVVAD VRPRKREDG
|
| |