| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_4755 |
|---|
| Symbol | |
|---|
| ID | 9248637 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 5642210 |
|---|
| End bp | 5642893 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, GntR family |
|---|
| Protein accession | YP_003682646 |
|---|
| Protein GI | 297563672 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCCC CAGGCCAGCT CAGACCCGTG CCCCGGCGTT CCACCGCCGA ACTGATCGCC
GACCAGCTGC GGTCCGCGAT CATGTACGGC TCGCTCGCGC CGGGTGACCA GCTCGGCGAG
TCCGAGCTGG CGGGTCAGCT CGGGGTGAGC CGCGGCCCCC TGAGAGAGGC GATGCAGCGC
CTGGTGCAGG AGGGGCTGCT GCGCAGCGAA CGGCACAGGG GGCTGTTCGT GCGCGAACTC
ACGCCCGCGG ACGTGCGCGA CGTCTACGTG GCCCGGCTCG CCGTCGAGCG GACCGCGTGC
GAGCTGATCA TGCGCGGCAA CCGGGGCGAG GCCGTCGCCC GCCTCACCCC GGCCGTGGAG
CGGCTCGCCG CCGCGGCGGC GGGCCGCGAC CGCAACGCCA TGAGCGACGC CGACCAGGCC
TTCCACCAGA CCCTCGTCAG CTGCGCGGGC AACAGCCGCC TGGAGCGCAT GGCGCAGACG
CTGCTGGTGG AGACCCGGAT GTGCCTCACG GTGATGCAGG ACGTGTACCC GGAGCCGGAG
GAGCTCCTGG ACGAGCACCG CCGCATCCTG GACGCGATCG TGGACGGGGC GGAGGAGGAG
CTGCTGCGCC TGATCGAGGC GCACATGGTG GACACGGTCG AGCGCATCAA CGGCGAGGGC
GGGGAGTCCG TCCCCGAGGC ATAG
|
|---|
| Protein sequence | MPAPGQLRPV PRRSTAELIA DQLRSAIMYG SLAPGDQLGE SELAGQLGVS RGPLREAMQR
LVQEGLLRSE RHRGLFVREL TPADVRDVYV ARLAVERTAC ELIMRGNRGE AVARLTPAVE
RLAAAAAGRD RNAMSDADQA FHQTLVSCAG NSRLERMAQT LLVETRMCLT VMQDVYPEPE
ELLDEHRRIL DAIVDGAEEE LLRLIEAHMV DTVERINGEG GESVPEA
|
|---|
| |