Gene Ndas_4622 details

Gene Information

• Locus tag: Ndas_4622
• ID: 9248503
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111
• Kingdom: Bacteria
• Replicon accession: NC_014210
• Strand: +
• Start bp: 5488246
• End bp: 5491320
• Gene Length: 3075 bp
• Protein Length: 1024 aa
• Translation table: 11
• GC content: 71%
• Product: hypothetical protein
• Protein accession: YP_003682514
• Protein GI: 297563540

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.119976
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 13
• Fosmid unclonability p-value: 0.339061
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGACGACCT TGTCCGACGA AGGCCTGATC GACCCCAGCG CGTTCCCCAT CCCCGACACC 
CTCACCTACC TCCTGGACTC GGCGGCGGCC AAGCTCAAGG CCGACGGGAC CGACCTGACC 
GACACCGCGG GTGACATCAC CGGTGCGTGG GCGGGCCTGG ACGGCATCTA CTCCGCACCC 
GAGTCCGCGA CGCTGTTCAA CGTCCTGAAC CCGCTCACCG GGGACGCCGA CGAGGTGTCG 
TCGGCGCTCT CCAGCGCCTC CGACGCGCTG ATCGACTTCG CCGAGAAGGC GCGCGACATC 
AAGGACCGCT GGTACACGCT GCGCAGCGAC TCCTACGCCT TCCTCCAGAG CATCGACTAC 
GGGCGTGACG AGGACTGGGA CGAGGGCAGC GGCATGCTCT GGTGGAAGGA GGAGAGCCCC 
AAGGTCGCCG AGCACAACGC CCTGCTCGAT CGGGCCGCCG CGCTCAAGCA CGAGTTCGAG 
GAGGCCGAGC GCACGTGCGC GAACGCCATC ACCGCGCTCT TCGGCGGCAC CACCTTCATC 
GCCCAGAGGG CCGACGGCAG CGTCACCCCG GGCGCGGGCG AGTTCGTCTA CGGTTTCGAC 
GCGCCCCTCG AAGGCGTCGA GATGGAGTGG GGAGCCCCCC AGACCAGCGA CTACGCCTGG 
TACACCGACG CCACGGACGC CGTCGGGGAC TACGTGGTCG GCATGGCCGA GGACCTCGGC 
GGCATGGTCG GGGCGCACGG CCCCGAGGGC TGGTTCTCCG GTTCGTGGGG CGACAACCTC 
TGGGACTACT GGGGCGGCAC CGTGGAGGGC CTCGGCTCCC TGGTGGGCGC GTCCCGGGAC 
GAGAACGGCA ACTGGGGCTG GTCCCTGGAG ACCGCCGGGA ACGCCTGGAA GGAGGCGGCC 
CACTCGGTGG TCCCGTGGCG GGAGTGGGGC GACCGGCCCT GGTACGTCAT CGGGACCGCG 
GCGCTCAACA TCGGCGCCAC GGTGGGCGGC GCCCTGCTGA CCGCCACCGG CGTGGGCGCG 
GTCGTCGGCG TCCCGCTCCT GGCCTGGCGC GGGTCGCGGA TCCTGGACGG GGTCAACGGC 
GGCCGTGCGG ACGCCGACCT GCCCGACGGC GGCGGGGTGG ACCTCCAGAC CCTCATGTCG 
CGCGTGCCCA GCTTCGGCGA CGGGTCCATC CAGCCGGTGG ACCTCAGCAG GCTCGCCGAC 
CTGGATCTGG ACCAGGGCGA GTTCGGCCGG ATGACCGACG CCCTGCAACG GCTCAACGAC 
CTCGACGGAG GCGACGGCGC CTCCCCCGAC CGGCCCGGCA ACAGCGACAA CCGCACGGTC 
CCGGTCGACG ACGCCGACGG GGTCGGCGGC GACAACGGGT CCGCGCCGCG CGCGAACACC 
GCGCCCGGGG ACGAGCCCGA GGCCGCGGAG CGGCGCGGGT CCTCGGACCG GGACCGCGAC 
GACGCGGAGG GCGACGGCGC CGACCAGGAC GCCGAGGAGC CGACCTATCC GACCACCGAG 
CTGCTCGACT CCAGCCAGGA CTTCCTCGAC GGCGTCGACC CCGAGTCCGT CCGGGGCCTG 
CGCGAGGGGA TGGACGGCCA GGAGAACGAC TGGGTGACCT CGCAGGTACC CGACGACGTC 
TCCTCGGTCA ACGACACCCC GGTCCAGCGC TACGAGTCCG AGCCCTCCCG CGTGGAGGCC 
GGGAACGAGC GCCCCGAGGA ACTCGTCCTC GCGGGCCGGG GAGAGCACGA GATCGCGGAG 
GGGGCGGACG GCGAGCGCGT CGACGCCCGC CACGACACCA CGGTCGACAA CAGTGCGGGT 
GGAACGACGT CCCTCGACAG CCCGCGCGGA GGCACGACGG TCATCGAGAC CGACTCCGGC 
CGCGGCGGTT CCGGCGGCGG CACGGGCGGT GGCGGCACCG GCGACGGACC GCCGCACTCG 
CCCGACCCCG GCGACGGGAA CGGTTCCGGA CCGGACGATC CCCTCGACGG CGACAGCGGT 
GACGGCGGCG GTGACGAAGA CCTGCCGAGC AACGTCCAGG ACCTGGCCAA CCACCGCTGG 
GGTGACACCC CCGAGGGCAG GAAACGCTTC TACCAGCACT TCCAGGACCT GCTGAACGAC 
CGCTCCAACG GGGTGTTCGA CCGGTTCTAC CAGGACAACG GCTACCGCAG GAGCCGGTTC 
ACGAAGGTGG GTCCCGAGGA GATCCCCCTC CCCAAGCTGA CCTGGGACAA GCACAACGGC 
CGGTGGATCG TCCAGGAGAC CCTTCCCGCC GCGGACCCGC CGGACTACAA GGGAGACGTG 
AACAAGCGCG ACGCGCTCGT CTCACGGGAT CCCGCGAACG ACGGCTACAC CTACCTCGAC 
GAGCTCGCGG AGAGGCGGCG CAGCGCCATC ACCGCGGACG GCACCGCGGG CACCAGGCTC 
CAGGCGCTGG AGGCGCGGTA CAAGGAGCAC CTCGACGCGG GCGGCAGCGT TCCCCGGGAC 
CTCGCCGCGG CCAGGGAGGT CTACGCCGAG CGGCACACCG ACATGCTCAG GGCCTCGGAG 
GGCTTCGGCG AGGCGACGGC CGACATCGCG ATCCTCGACC AGTTCGACGG CACACACCCG 
GCCCTCGACT CGGCGGGCAG GCCGGTCCTG GACGAGAACG GCGACCCCGT CAACAAGCCC 
AGGGTCACCG AGCAGATCAC CCTGCCCGAC ACCTCCCCCC GCAACGGGAA CCACCAGTTC 
GACCAGGTCT GGCGCACGGA GGACGGCGGG CTCGTCGTCG TCGAGGCCAA GAGCAGTACG 
GACACCCAGC TCGGCACGCG CTTGGCCGAG GTTCCGAACA GCACGCCGGT CAGGGTGTCC 
CAGGGAACGA GGGCGTATCT GGAGTCCATT CTGGAGAGCA TGCGGGAACG CGGGGAAAGC 
GACGCCAGAA ACGCGTTCAC CGAGGAGGAC CTGGCCGACG AGATCCAGGC CGCTCTGGAG 
AACGGCAAGC TCCACTACGT CGAGGTCAAG GGCAATCCCA TCACCAATTA CGATGACCAG 
GGCCAAATCC TGGATTCCCG GAGCGAAGGT TACTCCTTCC GAGAATTCGA CCTGGACCGG 
AGGGCAGGAC GTTGA 

 

Protein sequence

MTTLSDEGLI DPSAFPIPDT LTYLLDSAAA KLKADGTDLT DTAGDITGAW AGLDGIYSAP 
ESATLFNVLN PLTGDADEVS SALSSASDAL IDFAEKARDI KDRWYTLRSD SYAFLQSIDY 
GRDEDWDEGS GMLWWKEESP KVAEHNALLD RAAALKHEFE EAERTCANAI TALFGGTTFI 
AQRADGSVTP GAGEFVYGFD APLEGVEMEW GAPQTSDYAW YTDATDAVGD YVVGMAEDLG 
GMVGAHGPEG WFSGSWGDNL WDYWGGTVEG LGSLVGASRD ENGNWGWSLE TAGNAWKEAA 
HSVVPWREWG DRPWYVIGTA ALNIGATVGG ALLTATGVGA VVGVPLLAWR GSRILDGVNG 
GRADADLPDG GGVDLQTLMS RVPSFGDGSI QPVDLSRLAD LDLDQGEFGR MTDALQRLND 
LDGGDGASPD RPGNSDNRTV PVDDADGVGG DNGSAPRANT APGDEPEAAE RRGSSDRDRD 
DAEGDGADQD AEEPTYPTTE LLDSSQDFLD GVDPESVRGL REGMDGQEND WVTSQVPDDV 
SSVNDTPVQR YESEPSRVEA GNERPEELVL AGRGEHEIAE GADGERVDAR HDTTVDNSAG 
GTTSLDSPRG GTTVIETDSG RGGSGGGTGG GGTGDGPPHS PDPGDGNGSG PDDPLDGDSG 
DGGGDEDLPS NVQDLANHRW GDTPEGRKRF YQHFQDLLND RSNGVFDRFY QDNGYRRSRF 
TKVGPEEIPL PKLTWDKHNG RWIVQETLPA ADPPDYKGDV NKRDALVSRD PANDGYTYLD 
ELAERRRSAI TADGTAGTRL QALEARYKEH LDAGGSVPRD LAAAREVYAE RHTDMLRASE 
GFGEATADIA ILDQFDGTHP ALDSAGRPVL DENGDPVNKP RVTEQITLPD TSPRNGNHQF 
DQVWRTEDGG LVVVEAKSST DTQLGTRLAE VPNSTPVRVS QGTRAYLESI LESMRERGES 
DARNAFTEED LADEIQAALE NGKLHYVEVK GNPITNYDDQ GQILDSRSEG YSFREFDLDR 
RAGR