Gene Ndas_4163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4163 
Symbol 
ID9248037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4970705 
End bp4972735 
Gene Length2031 bp 
Protein Length676 aa 
Translation table11 
GC content72% 
IMG OID 
Productdrug resistance transporter, EmrB/QacA subfamily 
Protein accessionYP_003682064 
Protein GI297563090 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCAGT ACGAGGCCAG GCATCGGGCG CGCAGGGAGC ACCGGAGCGG CAGGATCGCG 
GTGATCATGA GCGCGCTGAT GCTCACCGTG CTGCTGGCGG CCCTGGACCA GACGATCGTG
TCCACCGCGC TGCCCACGAT CGTGTCCGAC CTCGGCGGGC TCAACCACCT GTCGTGGGTG
ATCACCGCCT ACCTGCTCGC GGTCACGGCC GTCACGCCGC TGTGGGGCAA ACTCGGCGAC
CAGTTCGGCC GCAAGCAGTT CTTCCTGGTG TGCATCGCCG TCTTCGTGGC GGGCTCGGCC
CTGTGCGGGA CCGCCCAGAG CATGCTCCAG CTCATCCTCT TCCGCGCGCT CCAGGGCGTG
GGCGGCGGAG GACTCATGGT GCTGGCCTCC GCCATCATCG GCGACGTCGT CTCGCCCCGC
GAGCGCGGCA AGTACCAGGG GCTGTTCGGC GCGGTGTTCG GGATCTCCAG CGTGGCCGGT
CCGCTGCTCG GCGGACTGTT CGTGGACCAC CTGTCCTGGC GGTGGGTGTT CTACGTCAAC
CTGCCGCTGG GGGTGCTGGC CTTCGTCACG GTGCTCGTGG TGCTGCCGCG CCGCCAGCCG
ACCGGCCGCC AGAGCATCGA CTACTCCGGG ATCGTGCTGC TGGCCGCCAC CGCGATCTGC
CTGACGCTGG TCGCCTCCTG GGGCGGCAGC CTCTACCCGT GGACGTCGCC GCAGGTCCTC
GGGCTCGGCG CCGTAGCCGT GGTGCTCGGC GTGGGCTGGT GGCTGTCCGC GCGGCGGGCG
CAGGACCCGG TCATGCCGCT CAGCCTGTTC CGCGACCCGA CCATCGTGGT GGCCATGGCG
ATCGGCTTCT GCGTGGGCTT CGCGATGATG GGGTCGATGG CCTTCCTGCC GCTGTTCCTC
CAGGTCGTGC ACGGCCTGTC GCCCACGGCC TCGGGACTGC ACCTGCTGCC GATGGTGCTG
GGCCTGTTCC TGACCTCGAT CACCAGCGGG CGCCTGGTCA CCCGCACCGG CCACTACAAG
GTCTACCCGG TGCTGGGGAT GGCGGTGACC TCCCTCGGAC TGTTCCTGCT CTCGCGGCTG
GGCCCGGAGA GCTCGATGAC GCAGATGGGG TTCTACTTCT TCGTCCTCGG TCTCGGCCTG
GGCCTGGTGA TGCAGGTGGT GGTCGTGGTG GTGCAGAACG CCGCCAGCTA CGCGAACCTG
GGAGTGGCCA CCTCGGCGGC GACGTTCTTC CGCTCCATCG GGGGGTCGTT CGGCACGGCG
GTGTTCGGCG CCGTCTTCTC CGGGCAGCTG GCGGCCAACC TGGCCGAGCG GGCCGCGCAG
ATCCAGCTGC CGCCCGGGGT GGACCCCGCG GCGCTGGAGA GCGACCCGCG CAGCCTGGAC
CAGCTGGCCC CGCAGGCGCA GGCGTCCTTC CTCCAGGCCT ACGCGGACGC CGTGGACACC
GTCTTCCTGT GCGCGGTCCC GGTCGCCCTG GCCGGGTTCG TGCTGGCGCT GTTCCTGCGG
CAGATCCCGC TGCGCACCAC CATCGACTCC CCGGACCTGG ACGAGTCCAT CCCGCCCGTG
GCCGCAGCGA GCCGCAGCGC CGTCGCGCAC GTGGAGAAGG AGGTGTTCCG GGCCTGCGGC
CGGGAGGGTG CCGACCAGAT GTACGAGCGC CTGCGCGAGG CGGCGGGCCT GGAGGTCTCG
CCGCGCGCGT GCTGGGTGCT CAGCCACCTG GGCGTGACGG GGCCGCTGTC GCCCGGGGAG
CTGGTGGAGA TGTCCGGGCT GCCCGCCGAC TACTGGGCGC CGGTCCACCG GGAGCTGGTC
GAGGCGGGCT ACCTGGCGGG TGGGGGCGAG CCCTGGGAGC TCAGCCGGCG CGGCGTGTCC
GCCGCCCGCA GGATGTTCGA GGCCCAGCGC ACCGCGCTGC GCTCGCTGCT GGCCGACTAC
GGGCCCGAGG AGCACCCCGA GGTGGTGGCC GCCCTGGAGC GGATCACCAC CGACGTCCTG
GGGGACGAGG GGGACGCCGG GCACCTGGAG CGGGGAGCGC ACCGGGCGTG A
 
Protein sequence
MVQYEARHRA RREHRSGRIA VIMSALMLTV LLAALDQTIV STALPTIVSD LGGLNHLSWV 
ITAYLLAVTA VTPLWGKLGD QFGRKQFFLV CIAVFVAGSA LCGTAQSMLQ LILFRALQGV
GGGGLMVLAS AIIGDVVSPR ERGKYQGLFG AVFGISSVAG PLLGGLFVDH LSWRWVFYVN
LPLGVLAFVT VLVVLPRRQP TGRQSIDYSG IVLLAATAIC LTLVASWGGS LYPWTSPQVL
GLGAVAVVLG VGWWLSARRA QDPVMPLSLF RDPTIVVAMA IGFCVGFAMM GSMAFLPLFL
QVVHGLSPTA SGLHLLPMVL GLFLTSITSG RLVTRTGHYK VYPVLGMAVT SLGLFLLSRL
GPESSMTQMG FYFFVLGLGL GLVMQVVVVV VQNAASYANL GVATSAATFF RSIGGSFGTA
VFGAVFSGQL AANLAERAAQ IQLPPGVDPA ALESDPRSLD QLAPQAQASF LQAYADAVDT
VFLCAVPVAL AGFVLALFLR QIPLRTTIDS PDLDESIPPV AAASRSAVAH VEKEVFRACG
REGADQMYER LREAAGLEVS PRACWVLSHL GVTGPLSPGE LVEMSGLPAD YWAPVHRELV
EAGYLAGGGE PWELSRRGVS AARRMFEAQR TALRSLLADY GPEEHPEVVA ALERITTDVL
GDEGDAGHLE RGAHRA