Gene Ndas_4152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4152 
Symbol 
ID9248026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4957186 
End bp4958094 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content69% 
IMG OID 
Producthelix-turn-helix domain protein 
Protein accessionYP_003682053 
Protein GI297563079 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCGCCG AAGAGGCACA GAATCTACAG GTCACCCAGG ATTTCCTGGC CAATTCCAGC 
GGTGGCCCCA CCGTGCTGCG CATTCTCCTG GGAACGCAGC TGAGGCGGCT GCGGCAGGAA
AAGGGGATTT CGCGGCACGA CGCCGGGTAC GCCATCCGCG CCTCCCACGC CAAGATCAGC
CGCATGGAGC TGGGCCAGGT CAGCTTCAAG CGCCGCGACG TGGACGACCT GCTCAAGCTC
TACGGCGTGG ACCGGGCGGA CCAGCGCGAG GCCCTCCTCG GGCTGGTCTC CAGCGCCAAC
GCCCAGGGCT GGTGGCACAA GTACGGCGAC GTGCTGCCGA ACTGGTTCGG CGTCTACGTC
GGCCTGGAGG AGGCCGCGTC GATCATCCGC ACCTTCGAGG TGCAGTTCGT TCCGGGCCTG
CTCCAGAGCG AGGACTACGC GCGCTCGGTC ATCCGCCTGT CCCGGACCGC CACGTCCGAC
GATGACGTGG ACAGTCGTGT GCAGATGCGC ATGCGCCGCC AGCGCAGATT CGTCGAACCG
GACGCGCCCA GACTGTGGGC GGTCATCGAC GAGGCCGTGC TGCACCGCCC CTACGGCGAC
ACCCGGGTGA TGCGCGGGCA GATCGAGCAC CTGATCGAGA TGGCCCGCCG CCCCAACATC
ACCCTCCAGA TCGCCACCTT CGCCATGGGC GGCCACCCCG CCGCGGGCGG CCCCTTCAGC
ATCCTGCGCT TCCCCACCCC CCAGCTGCCC GACGTGGTCT ACCTGGAGCA GCTGAGCAGC
GCCCTGTACT TCGACAAGTA CGACGACACC CACCGCTACG CGCAGACGAT GGACCACCTC
GCCACCCAGG CGCCGCCGCC CTCCGCCACG GAGGAGATCC TCCGCGGCTT CCTGGAGCGC
TACTCCTGA
 
Protein sequence
MVAEEAQNLQ VTQDFLANSS GGPTVLRILL GTQLRRLRQE KGISRHDAGY AIRASHAKIS 
RMELGQVSFK RRDVDDLLKL YGVDRADQRE ALLGLVSSAN AQGWWHKYGD VLPNWFGVYV
GLEEAASIIR TFEVQFVPGL LQSEDYARSV IRLSRTATSD DDVDSRVQMR MRRQRRFVEP
DAPRLWAVID EAVLHRPYGD TRVMRGQIEH LIEMARRPNI TLQIATFAMG GHPAAGGPFS
ILRFPTPQLP DVVYLEQLSS ALYFDKYDDT HRYAQTMDHL ATQAPPPSAT EEILRGFLER
YS