Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_4072 |
Symbol | |
ID | 9247944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 4868014 |
End bp | 4870671 |
Gene Length | 2658 bp |
Protein Length | 885 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | protein-export membrane protein SecD |
Protein accession | YP_003681974 |
Protein GI | 297563000 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCCAGTC AAACGGGAGC GGGCGCGCGT TGGACACGCG CCCTCATCTC CCTTCTCGTC ATCCTCGTCG CGTTCGGCGC GGCGTGGTTC ATCCCGCCGC GCCTGGGGCT CGACCTCAGC GGCGGCACAC AGATCGTCCT GGAGACCCAG GACGGCCCCG AGGGCACACC CGCCAACTCC GAGAACACCG ACCAGGTCGT CGAGGTGCTG CGCCAGCGCA TCGACCGCCT GGGCGTGTCC GAGGCGACCA TGTCGCGCTC GGGCGAGAAC CGGATCATCG TCGAACTGCC CGGTGTGCAG GACCCGGCGG AGGCCGCGCA GATCATCGGC CAGACCGCCC AGTTGTCCTT CCACCCCGTG CTGGGCGTGG GCCAGGCCGG CGGCCAGGGC GTGCAGGCGC CCGCCCCGGG CGACTCCGCC AACGCCCCGC AGGCCACCGC GGACGAGGCG CGCGCCCCGT CCGACGCCGC GGCCGAGGGC GGTGACGAGG CCGCCGAGGG CGGCGGCGGG GAGATGACCC AGGAGCAGCT CGAAGAGCTC ATGGCTCAGC AGGGCGGCAT GGGCGGCCAG CAGCCCCCCG CCGGCCCCAG CGCGGAGAAC CCCGAGGACG TCGTGATGAC GCTCCCCGAC TCCGACGGCA CCCAGCTCCA GCTCGGCGAG ACCGCCATCA AGGGCGACCA GGTGGCCAGC GCCGAGGCCG CGCTGGACAG CGTCAACCGC GCGCAGTGGA CGGTCAACGT CAACTTCCGC GGCGAGGGCG CCGACCAGTG GACCGCGCTG ACCGCCGACG CCGCCTGCTA CGAACAGGGC GACCCGCGCC GCCGCGTGGC CATCGTGCTG GACGGGCAGA TCATCTCCGC CCCGGAGGTG AACCCGGAGT TCTCCTGCGA CGTGGGCATG CCCGGCAACA CCACCACCAT CACCAGCCCC GACTTCACCA GTGAGACCGC CAACGACCTG GCCGTGCTGA TCGAGGGCGG CTCGCTGCCG CTGCCGGTCA CCGAGGTCCA GCGCCAGACG GTCGGCCCGA CCCTGGGCGC CGAGGCCATC CAGGCCAGCG CCGTCGCCGC GATCCTGGGC CTGGCCTTCA CCACGCTCTA CATCACGCTG GTCTACCGGC TGGTCGGCTT CCTGGCCGCC CTGGCCCTGG GCTTCTACAC GCTCATCGCC TACGGCGCCC TGGTCGCCAT CAACGCCACA CTGACGTTGC CGGGCCTGGC GGGTTTCGTG CTGGCGATCG GTATGGCCAT CGACGCCAAC GTGCTGATCT TCGAACGCAC ACGTGAGGAA CACCAGCGCC AGGCGAAGGT CTACGAGGCC AACAAGTCCG CCGGGCTGCG GGACGCCACC GAGGACGAGG CGGCCAAGGC CGAGTCCGGG GTGCTCACCC GCAAGCGGCG CCGGGCGGTG CCGCCGAGCC TGGAGAAGGC GTTCGTCGTG GGCTCCCGCA AAGCGTGGAG CGCCGTCCTC GACACCAACA TCACCACGCT CATCGCCGCC GCCCTGCTGT TCTTCTTCGC CTCGGGCACC GTGCAGGGCT TCGGCGTGAC CCTGAGCATC GGCACCCTCG TCTCGATGTT CTCCGCGCTG GTCATCGCGC GCGTGTTCGT CGAGTGGGCG GTGCGGCGCG CGGTCGTGCG CAAGCACCCG GCCGTCAGCG GCCTGAACCG CATCGGCGGC GTCCGCACCT GGCTGGTCGA GAAGAACCCC GACCTCATGG GCCACCGCGC CAAGGGTCTG ATCGTGGCGG GTCTGATCGT GGCGGCCGCG GTCGCCGCGC CACTGATCCG CGACACCAAC CTCGGTGTGG AGTTCACCGG CGGCCGCGTG CTGGAGTACG AGGTCACCAG CGGGGAGGGC GTCTCGGTCG ACGAGGCCCG CTCCGTCATC TCCGCGCTGG ACTTCCCCGG CTCGGACACG GCCGTGGTCC AGGAGTCCGG TGACGGCGAC ATCTCGGTGC GCACCGGCAG CATCTCCGAC GACGACGCGG CCCGGATCGC CGACGCCCTG GGCGAGCAGA CCGGCGGCGT GGAACTGGTC AGCGACGAGC TGATCGGCCC GAGCATGGGC GACGAGCTGC GCAACCGCGC GCTGATCGCC CTGGGCGCGG CCCTCGCGCT CCAGATGGTC TACCTGGCCT GGCGCTTCCG CTGGTCGTTC GGCGTGTCCA CCATGCTGTC GCTGGCCTTC AACCTGGTCC TGGTGATCGG GCTGTTCATC TGGCTGGGCA AGCCGATCGA CGGCGTGTTC CTCGCCGCGC TCCTGAGCGT CATCGGCTTC TCCGTCAACG ACACGGTGGT GGTGTTCGAC CGGGTGCGCG ACGAGTGGGC CCGGGACGAG AGGTCGAAGT TCTCCGAGAT CGCCAACCGC GCGGTGCTCA ACACCCTGCC GCGTACCGTC AACACCTCCA TCGGCGCGCT GATCATCCTG GGCTTCCTGA CCTTCCTCGG CGGGTCCTCG CTCCAGGACT TCTCGATCGC CATGCTGGTG GGTCTGGTGA CGGGCGTCCT CTCGACGATC TTCGTCGCCG TCCCGCTGGC CATCTGGCTC CAGAGGTGGG ACAGGACCGA CCCGCCGCAC GTGGTCAAGG AGCGCAAGGC CAAGCAGAAG GTGGCCGCCA AGGCCGCCCG CGAGGCCGAC GACGGCGCCG TCGTCTAG
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Protein sequence | MSSQTGAGAR WTRALISLLV ILVAFGAAWF IPPRLGLDLS GGTQIVLETQ DGPEGTPANS ENTDQVVEVL RQRIDRLGVS EATMSRSGEN RIIVELPGVQ DPAEAAQIIG QTAQLSFHPV LGVGQAGGQG VQAPAPGDSA NAPQATADEA RAPSDAAAEG GDEAAEGGGG EMTQEQLEEL MAQQGGMGGQ QPPAGPSAEN PEDVVMTLPD SDGTQLQLGE TAIKGDQVAS AEAALDSVNR AQWTVNVNFR GEGADQWTAL TADAACYEQG DPRRRVAIVL DGQIISAPEV NPEFSCDVGM PGNTTTITSP DFTSETANDL AVLIEGGSLP LPVTEVQRQT VGPTLGAEAI QASAVAAILG LAFTTLYITL VYRLVGFLAA LALGFYTLIA YGALVAINAT LTLPGLAGFV LAIGMAIDAN VLIFERTREE HQRQAKVYEA NKSAGLRDAT EDEAAKAESG VLTRKRRRAV PPSLEKAFVV GSRKAWSAVL DTNITTLIAA ALLFFFASGT VQGFGVTLSI GTLVSMFSAL VIARVFVEWA VRRAVVRKHP AVSGLNRIGG VRTWLVEKNP DLMGHRAKGL IVAGLIVAAA VAAPLIRDTN LGVEFTGGRV LEYEVTSGEG VSVDEARSVI SALDFPGSDT AVVQESGDGD ISVRTGSISD DDAARIADAL GEQTGGVELV SDELIGPSMG DELRNRALIA LGAALALQMV YLAWRFRWSF GVSTMLSLAF NLVLVIGLFI WLGKPIDGVF LAALLSVIGF SVNDTVVVFD RVRDEWARDE RSKFSEIANR AVLNTLPRTV NTSIGALIIL GFLTFLGGSS LQDFSIAMLV GLVTGVLSTI FVAVPLAIWL QRWDRTDPPH VVKERKAKQK VAAKAAREAD DGAVV
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