| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_3940 |
|---|
| Symbol | |
|---|
| ID | 9247811 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 4709678 |
|---|
| End bp | 4712404 |
|---|
| Gene Length | 2727 bp |
|---|
| Protein Length | 908 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | Phosphoenolpyruvate carboxylase |
|---|
| Protein accession | YP_003681843 |
|---|
| Protein GI | 297562869 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.622429 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAACG CCCGGGCAAA ACATCGAAAA TACGCCCCCG CGCACCTGGC GGCGGGTGCG
ATCTCTGTAG GGTCGGTGAC CATGACAGCG GTAAGCGCGG AACGCGACAG TGCACGGCAG
GAAGTTCCCG AGCAGCTCAG GAATGACGTC AAACTGCTCG GCGAGATGCT CGGAACGGTC
CTCGCCGAAA GCGGCGGCGA GGATCTGCTC GCCGATGTCG AGAAGCTCAG GAGGGCGGTC
ATCGGCGCCC GCGACGGGTC GGTCACGGGG GAGGAGATCA CCGCGATCGT CGCCGCCTGG
CCGCTGGAGC GCGCCAAGCA GGTGGCCCGC GCCTTCACCG TCTACTTCCA CCTGGCCAAC
CTGGCCGAGG AACACCAGCG GATGCGGGCC CTGCGCGAGC GCGACGACGC CGCCAACCCG
CCCCGCGAGT CCCTCGCGGC GGCCGTCCGC GCCATCCGCG AGGGCGAGGG CGGTGAGGAA
CGCCTCGACG AGCTGATCGC GGGCATGGAG TTCCACCCCG TGGTCACCGC CCACCCCACC
GAGGCGCGCC GCCGCGCCGT GTCCACCTCC ATCCTGCGCG TCAGCGCCCA GCTGGAGGCC
TGGCACTCCT CCCACGAGGG CAGCAGCGCC GCGGCCGAGG CGCACCGGCG CCTGCTGGAG
GAGATCGACC TGCTCTGGCG CACCTCCCAG CTGCGCTACA CCAGGCTCAA CCCGCTCGAC
GAGGTGCGCA CCGCCCTCGC CGCGTTCGAC GAGACCATCT TCTCCGTCAT CCCGCAGGTC
TACCGGAGCC TGGACGCCGC CATCGACCCC GAGGGCACCG GCGTGCGCCC GCCCCGCGCC
ACGCCCTTCG TGCGCTACGG CAGCTGGATC GGCGGCGACC GCGACGGCAA CCCCTACGTC
ACCTCCGACA TCACCCGGGA GGCCGTGCTC ATCCAGTCCG AGCACGTGCT GCGCGGCCTG
GAGGCCTCCT GCACCAAGGT GGCCCGCACC CTCACCGCCT ACTCCAACCT CACCCCCGCC
AGCCCGGCGC TGCTCGACGC GCTCGCCTCG GCCAAGGCGG GACAGCCCGA GCTGACGGCG
GAGATCGGGG CGCGCTCGCC CAACGAACCG CACCGCCAGC TCCTGCTGCT GGCCGCCGCC
CGGCTGCGCG CCACGCGCGA GCGCGACGCC GACCTGGCCT ACCCCGACGC CGACGCCTTC
CTGGCCGACC TGCGCACCGT GCAGGAGTCC CTGGCCGAGG CGGGCGCGGT CCGCCAGGCC
TACGGCGAGC TCCAGCACCT GGTCTGGCAG GCGCAGACCT TCGGCTTCCA CCTCGCCGAA
CTGGAGATCC GCCAGCACAG CGAGGTGCAC GCCGCCGCGC TCGCCGAACT GCGCGAGGGC
GGGGAGCTCT CCGAGCGCAC CGAGGAGGTC CTCGCCACGA TCCGGGTGAT CGCCTGGATC
CAGGAGCGCT TCGGCGTGGA GGCCTGCCGC CGCTACGTCG TCAGCTTCAC CCGCTCGGCC
GAGGACATCG CGGCCGTGTA CGAGCTGGCC GCCCACGCGC TGCCCGCCGG ACGCGTGCCC
GTCCTGGACG TCGTCCCGCT GTTCGAGACC GGCGCCGACC TGGACGCCTC GCCGCACGTG
CTCGACGGCA TGCTCAAGCT GCCCCAGGTC AACAAGCGCC TGGACGAGAC CGGCCGCAGG
ATCGAGGTCA TGCTCGGCTA CAGCGACTCC GCCAAGGACG TCGGGCCGGT CAGCGCCACC
CTGCGCCTCT ACGACGCCCA GGCCCGCCTG GCCGCGTGGG CGGAAGAGCA CGACGTGCGC
CTGACCCTGT TCCACGGCCG CGGCGGCTCG CTCGGCCGCG GCGGGGGCCC GGCCAGCCGC
GCCCTGCTCG CCCAGGCGCC CGGCTCGGTC GGCGGACGGT TCAAGGTCAC CGAGCAGGGC
GAGGTCATCT TCGCCCGCTA CGGCCAGCCC GCGATCGCCC GCCGCCACAT CGAGCAGGTC
GGCCACGCGG TGCTGATGGC CTCCACCGAC GCCGTCCAGG AGCGCGAGCG CTCCGCCGAG
CGCCGGTACC GCGCCCACGC CGACACCATC GCCCGCGCCG CCCAGGAGGC CTACCTGGAG
CTGATCAACA CCGAGGACTT CGCGGTGTGG TTCTCCCGGG TCAGCCCCCT GGAGGAGCTG
GGCGAGCTGC GGCTGGGCTC GCGCCCCTCG CGGCGCGGCG CCGCGCGCGG GCTCGGCGAC
CTGCGGGCCA TCCCGTGGGT GTTCGCCTGG ACCCAGACCC GGGTCAACCT GCCGGGCTGG
TTCGGCCTGG GCACGGGCCT GGCCGCGGTG GAGGACCTGG GCGTGCTCCA GGCGGCCTAC
CGCGAGTGGC CCATGTTCTC GTCCCTGCTG GACAACGCGG AGATGAGCCT GGCCAAGACC
GACCGCGACA TCGCCCAGCG CTACCTGGCG CTGGGCGGGC GGCCGGAGCT GACCGAGCGG
GTGCTCGCCG AGTACGACCG CACCCGCGAC CTGGTGCTCA AGGTGACCGG GCACAGCCGC
CTGCTGGAGA ACCGGGCGGT GCTCTCCCGC GCGGTGGACC TGCGCAACCC GTACGTGGAC
GCGCTCTCGC ACCTCCAGCT GCGCGCCCTG GAGGCGCTGC GGGGCGAGGA GGCCGACTCC
CTGTCTGAGG AGGACCAGCA GCACCTGGAG CGGCTGCTGC TGCTCTCGGT CAACGGCGTG
GCGGCCGGAC TCCAGAACAC CGGCTGA
|
|---|
| Protein sequence | MVNARAKHRK YAPAHLAAGA ISVGSVTMTA VSAERDSARQ EVPEQLRNDV KLLGEMLGTV
LAESGGEDLL ADVEKLRRAV IGARDGSVTG EEITAIVAAW PLERAKQVAR AFTVYFHLAN
LAEEHQRMRA LRERDDAANP PRESLAAAVR AIREGEGGEE RLDELIAGME FHPVVTAHPT
EARRRAVSTS ILRVSAQLEA WHSSHEGSSA AAEAHRRLLE EIDLLWRTSQ LRYTRLNPLD
EVRTALAAFD ETIFSVIPQV YRSLDAAIDP EGTGVRPPRA TPFVRYGSWI GGDRDGNPYV
TSDITREAVL IQSEHVLRGL EASCTKVART LTAYSNLTPA SPALLDALAS AKAGQPELTA
EIGARSPNEP HRQLLLLAAA RLRATRERDA DLAYPDADAF LADLRTVQES LAEAGAVRQA
YGELQHLVWQ AQTFGFHLAE LEIRQHSEVH AAALAELREG GELSERTEEV LATIRVIAWI
QERFGVEACR RYVVSFTRSA EDIAAVYELA AHALPAGRVP VLDVVPLFET GADLDASPHV
LDGMLKLPQV NKRLDETGRR IEVMLGYSDS AKDVGPVSAT LRLYDAQARL AAWAEEHDVR
LTLFHGRGGS LGRGGGPASR ALLAQAPGSV GGRFKVTEQG EVIFARYGQP AIARRHIEQV
GHAVLMASTD AVQERERSAE RRYRAHADTI ARAAQEAYLE LINTEDFAVW FSRVSPLEEL
GELRLGSRPS RRGAARGLGD LRAIPWVFAW TQTRVNLPGW FGLGTGLAAV EDLGVLQAAY
REWPMFSSLL DNAEMSLAKT DRDIAQRYLA LGGRPELTER VLAEYDRTRD LVLKVTGHSR
LLENRAVLSR AVDLRNPYVD ALSHLQLRAL EALRGEEADS LSEEDQQHLE RLLLLSVNGV
AAGLQNTG
|
|---|
| |