Gene Ndas_3503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3503 
Symbol 
ID9247372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4196635 
End bp4203072 
Gene Length6438 bp 
Protein Length2145 aa 
Translation table11 
GC content67% 
IMG OID 
ProductYD repeat protein 
Protein accessionYP_003681410 
Protein GI297562436 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAACA GCCGTGTCAT CCGTTTCATC AAGAGGCCGA TGACCTATGC CGCGACTCTG 
GTCCTGGTCG GCAGCCTCCT CCAGGCCGCT CCCGCGTCCT CGCTCACCTT CAACACCCGC
CCCGAGGTGG AGGACGAGGC GTCCGTTCCG GGCGAGGACA TCGCCGGGGC CCTCGACGCG
CCCTCGACCG AGGACGCGGC TACTGACGCC GCTCTGACCG AGCCCCTGGA GGCCAGTTGG
CCGACCGGTG ACGTCGGCGA GACCGGGCTC ACCGACCCCG GAACTGACCT CCAGGTCGTC
GATGACCTGG TCACGGTCGC CCAGGTCTCC GACGACGTCC AAGAAACGTG GGTTGAAGAA
GTAGCCGAGG ACTACGTCGA CACCGGAGCT TCCGAGGACG AGGAGGACCC CCAGCAACAG
GGGGACGCGC CCGCGCGTTC TGAGGAGGGT CCGGACGCGG GGCAGGAACA GCCGGAGAGC
CCAGAGCCGG AAGCGGAAAC CGGCAGCGCA CCCGAAGCGG AGAACACAAC CGAATCCGCC
CCCGAAGAGG TGGAGGAAAC CGATCCGGCG GTCAGCAGCG TCGAATCCGT CCAGGTGGAG
GTCCTCGACC GCTCTGCGGC CGAGGAAGCG GGGATCGAAG GGCTGCTTCT CCGTGTGACC
CGGACCGACG ACGAGACCGG TGTCGGCCCG GTCGACCTGA CGGTCGACTA CTCCGACTTC
GCCAACGCCT ACGGCGGTGA CTACGGGGGC CGCCTCGACC TGGTCGAGGT CGACACCTGT
CTCCTCGACG ACTCCGTCGA GTGTCAGGAC CGTGCTCCGC GCACGTTCAC CACGGACAAC
GACACCGACG CCCAGACGCT CAGCGGGACC GTGCCCGCCC TGGGCGGAGA GGGCATGCTC
CTGGCCGCGG CCGCAGAGGA GGAGGGCCCC CGAGGCGACT ACCAGGCCAC CGACCTGTCC
GCCACGTCGA GCTGGGACGT CGGTCTCCAG ACTGGCAGTT TCTCCTGGAG CTACCCCGTC
GACACACCCC CCGTCGCCGG TGACCTGACC CCGGGCATCG AACTGGGCTA CTCCTCGGCC
TCCGTGGACG GCAGGGTCTC CTCCTCCAAC AACCAGACGT CCTGGATCGG TGAGGGCTTC
GACTACAACC CCGGCTTCAT CGAGCGCAAG TACGTTCCCT GCGCCGACAG CCAACCGGAC
TCGGCCAAGA CCGGGGACCT GTGCTGGTCC CGGCACAACG CCACGTTCTC GCTGAACGGC
CGCTCCGGCG AGATGTTCCT GGACGAGGAC GGGACGTGGC GGATGCGCCA CGACGACGCG
TCCCGCATCG AGCGGCTCAC CGGCACCACC AACGGCGACA ACGACGGCGA GTACTGGCGC
ATCACCACCA CGGACGGCAC CCAGTACTAC TTCGGGATGA ACCGGCTTCC CGGCTACGGC
AGCGGCGATG CCGAGACGAA CTCGGCGTGG ACGGTGCCGG TGTTCGGCCG GAACTCGGGT
CAGCCCTGCA ACGGTTCCAG CTTCGCCAAC TCCTGGTGCC AGCAGGCATG GCGGTGGAAC
CTGGACTACG TGGTGGACGC GCACGGCAAC GTGATGACCT ACCAGTACAC CAAGGAGCGC
AACTACTACG GCCGCAACGG ACAGGCCAAC TCCCCCACGG TCTACGACCG GGGCGGATAC
CTGCGCCGTA TCAACTACGG TCTGCGTTCC GACGACGTCC ACGCCACCGC TCCCGCCCGG
GTCAACTTCG CGGTCAGCGA GCGCTGTATC CCCACGGACG GCTTCGACTG CGCCGAGGAC
AAGTTCACCA GCGGCAACGC CAGACACTGG CCGGACGCCC CCTTCGACCG GCACTGCGCG
CAGGGGCAGA ACTGCACCAA CAAACTCTCC CCGACCTTCT GGACCCGCAA GAAGCTGGAC
TCCATCACCA CCCAGGTCCA CGACGGCTCC GCCTACGACA ACGTCGACTC CTGGGAGCTG
GAACACGTCT ACCCCGCGAA CGGCGACGGC ACCCCGCCGG ACCTGTGGTT GCAGTCGATC
ACCCACACCG GCCACGTGGG CGACACCGCC TCCATGCCCA CGCTGGAGTT CGGCGGCACC
CAGCTCGAGA ACAGGGTCGA CACCCAGGAC GACGGCTTCG CCCCCATGCT GAAGTGGCGG
ATCACGAAGA TCCTCACCGA GAGCGGCTCC CAGACCGACA TCCGCTACGC CGGTGGTGAG
TGCGACACCG GGGACTTCCC GGACCCCCAC ACCAACGGCA CCCGCTGCTT CCCGGTCGTG
AACAGCACCG CGGACGGCAA GGGCGAGTAC ACCGACTGGT TCCACAAGTA CGTGGTGACC
CAGGTGAGTG AGCACGACCT GGTCACCGCA CAGCCGGACC TCATCACCGC CTACGAGTAC
CTGGGCGACG CCGCCTGGCG TTACCAGGAC GCCGACGGGT TCGTACGCGA CGAGCGGCGC
ACCTGGTCCG ACTGGCGCGG ATACGCGCAT GTCCGCGTCA TTGAAGGCCA TGCCAACGCC
ACCCGGTCAG CGACCGAACA CCGCTTCTTC CGCGGCATGC ACGGAGACCG CCTGCCCAAC
GGGACCCGAA CCGCCACGGT GACCGACTCC GCGGGCGGCG AGCACAGCGA CCTCAACCAG
TACAACGGGT TCACGCTGGA GGAGGCCACA CTCAACGGAC CCGGCGGGGA CGTCGTGGAG
AAGACCATCT CCCTGCCCTG GAGCCGGGTC ACCGGTGAGC GGACCTACTC GTGGGGCACC
CTCGAGTCCC GTATGACGGG GATGGCCTCC AGCACCCAGT ACACGGCCGT CGGCGACGGA
TGGATGCGTA GCAGGGAGAG CGCGGAGTAC GACTCCCTGG GCCGCATCAC CCAGACCCAC
GACCACGGTG ACCTCGACGA CGCCGACGAC GACCAGTGCA CCCGCTACAC CTACGCGGAC
AACACCGGTC GCAGGATCCT GGACACCGTA GCCCGCACGG AGAAGGTCGC GGTCGGCTGC
GGCACGACTC CCGCCTACCC CGACGACCTG ATCAGCGACG AGCGCTCCCT CTTCGACGGA
GGCGGCTTCG GAGACGCCCC CACCGTCGGA CTGGAGACCA GCTCCCAACG GGTCATGGAG
TACGACGGCT CCACCCCCAC CTACCAGGTC GTGCAGGAGA GGGAACACGA CGCCTACGGG
CGCACCGTCT CCGAGACCGA CGCGCTCGGC AACGTCACCG AGACGGACTA CACGACCACC
GTGCCGGGCG GTGCGCCGAC CACCGTCACC ACCACCAACC CGCTCGGCCA CACCACCACC
GAGCACTTCG ATCCCGCACG CGGGCTGCCC GTGGCGGAGA TCGACGCCAA CGGCAACCGC
AGTGACATGA CCTACGACCC CCTGGGACGC CTGACCGCGG TATGGACTCC CGACCTGAAG
AAGTCCGATG ACGATCCGGC GATGCGGTTC GAGTACCACG TGCGAAATGA CGCCCCCACG
GTGGTGGCGA CCCACACCCG CAACAACGAG GGCGGCTACT CCTCGACCTA CCAGATCTAC
GACGGGCTGC TGCGTGAACG CCAGCGTCAG GAGCCCGGTG TGGGCGGCAG ACGCCTGATC
ACCGACACCT TCTACGACAG CCGTGGTCTG AAGGTCAAGG AACGCCACGC CTACACTAAT
GACGAGGCGC CCGCGCAGGA CATCTTCGTG CCCGGCAACA AGGACGTGCC CGGCGGCAAC
GACGACCTCA TCCCCCGGTA CACCCAGACA GTCTACGACG GCGCGGAGCG CCCGACCGAG
GTCCTGACCA TGTCCAACGG CCAAGAGCTG TGGCGGACCT CTTCCGAGGA CCGCGGTGAC
CGCCAACTGG TCACACCGGC TCCGGGCGCC ATCCCCACCA CCACGATCAA GAACGCGCGC
GGCCAGACCA TCGAGGTGCG CCAGCACCAG GGCGACACCC CCGAAGCCGA CTACACCGCT
CTGACCTACA CCCACACCCC GGCGGGGCAG GTGGAGACGG TGACCGACGA GGCGGGCAAC
GTCTGGCGCA ACCACTACGA CCTGCGGGGG CGCAAGGTTC GTACCGACGA GCCCGACCGG
GGCACGACCA CGTTCGTCTA CGACTCCGCT GACCGCATGG TGGCCCGGAC CGACGCCCGG
GACGAGACGG TCGTCTACGC CTACGACGAA CTCGGCCGTA AGACCGAACA GCGGGAGGGC
GGAGTCAACG GTCCCCTGCT CGCCTCGTGG ACCTTCGACT CCGTCGCCAA GGGCGAACTG
ACCCGTGCCA CCCGGCATGC CGATGGACTG CAGTACAGCA CGTCCATCGC CTCCTACGAC
GCCATGGGCC GGCCGCTCGC GACGACGATC AGCATCCCCT CCGCACCGGA GTACGGGGCT
CTGAGCGGGT CCTACCGGTT CCGGAGCACC TATAACGCCG ACGGCACCAT CGAGACGGAG
ACACTGCCCG CGGCAGGAGG GCTGCCCCGC GAGTTCGTCC GCTACACCTA CAACGAGCTG
GGCCTGCCGG TCTCGGTGGC TGGCTCGCTC GAAGGAGTGG AGACGCTCGA TTACGTCCAC
GAAACGTCGT ACTCGGCCCA CGGGCAGATC ATGCAGCGGT GGCACCACCG CAACGACGGA
TCGACCCAGG CCAAGTCCAC CTGGTCCGCG CGAACCTACG ACCCGGGCAC TCAGCGGCTC
CTCACCGCGC GGGTGAGCCA CGAGATCGGC CATGGGACGC TGGTCGACCA GACCTACTCC
TACGACGCGG CCGGCAACGT GCTGAGCATC AGGGACGAAC CCACCGCCCA GGGCCTGCTG
CCGGACGTGC AGTGCTTCGC CTACGACGAC ATGCGCCGCC TCACCAACGA GTGGACCACG
TCCGCAAGCG GTGAACAGGC CTGTGACACC ACCCCGTCCC GGGAGGCCAT GGGCGGCGCC
GCGCCGTACT GGAACAGTTA CACCTACGAC GACCTCGGCA ACCGCCTCAC CGAGACCCGC
CACGGATTCG TTGACGGCAG CGACGTCGAG AGGACCTACC AGCGTCCCGG GGCGGGGGAG
GAGCGTCCGC ACGCGGTGAC CCGGGTGGAC TCCAACGGTG CTGGCGGAAC CGCTACCTAC
ACCTACGACG AGGCCGGGAA CATGGCCTCC CGGCAGGACG GCAACCGCAC ACAGACGCTG
GAGTGGGACG CCGAGGGCCA GCTCGCGGCC ATCCACGAGG GCCAGAACAC CTCGGAGTTC
GTCTACGACG CCGAGGGCGA GCGGCTGATC CGCGACGACG GCGGTGTGGT CACGCTGTTC
CTGCCCGGCA TGGAGATCAA GTACGACAAG GAAGACCTGA TCTCGCAGTC CACCCGTCTC
TACGAGCACG CCGGTGAAGT CGTCGCCAGC CGCTCCAACG ACGGCAGGGT GCACTGGATC
TTCTCCGACC ACCACAAGAC AGGCCAGCTC GCGATCGACT CCCTCACCGG GGAAGCGATC
CGGCGCAGGT TCACCGCTTT CGGCGGAGAC CGCGGAAGCG TCGGTGGGTC CTGGCCCAAC
TCGCGCGGGT TCGTCGGCGG AGTCATCGAC GAACAGGTCG GCCTGACCCG GCTCGGGGCG
CGCTCCTACG CACCGGAGTT GGGGTCGTTC ATCTCTCCGG ATCCGGTCGT GGACTTCAGC
GACCCCGAGC AGATGCACGG GTACTCCTAC TCCAACAACA ACCCGGTGTC CTTCACCGAC
CCCGACGGTC TGTTCCTGAG GAAGGCCTTC GCGCAGGCCC GGAGGTGGGC CGTCTACCAG
GCCCGCCAGG CCGCGATCCG CGCTTACCAG GCCCGTCTGG CCGCGATCCG GGCGTACCGC
ATTCGCCAGG CCGCGATCCG TGCGGCGCAG ATTCGCGCCG CGCAGATTCG CGCCGCTAAG
ATCAGGGCTG CTCAGATCCG CGCCGCCAAG ATCGCGGCTG CGAAGAGGGC GGCGGCCGCG
AGGGCCGCTG CGGCGCGTAA GGCAGCTGCG GTGAAGGCCG CGCGGGAGAG GGCGGCGAGG
GTCGCTGCGG AGAGACGTCG AGATGCAGCA CGTCGTAAAG CTACGGAGCG GGACGTACAG
CAGAACGAAC GTAGAACTAG TTTCGAAAGT GTGACCCCTG CCGGCCTTCC TTCGGGTGCA
AAAGATGTCA CTGATTCAAA GGGAGAAAAA GAGAATTTTA GAGGAATGAC TTACGAAGAG
CATATGGAAT CGTGTGAAGA AACATTTACA GGTATCCAAA CTACTTTCGC CAAAGTCGTT
CTTTGGCGAG GGGCGGCGGC CAGCGTCGTT GCTGCGGGCC TGACGGGAAT GGGCGCTGGG
GTGGGGACCG CTATTGCTGC TGGAGCTGGG GCCGGCGGGG CGATGTTTTA CGGAGGCATT
GATAATAATA TCAATCGGTA TGCCTCGTCA TATGGTGAAT TCATGGGAGG CGTGAATGCC
AGAATTCTTT GCTCCTAG
 
Protein sequence
MANSRVIRFI KRPMTYAATL VLVGSLLQAA PASSLTFNTR PEVEDEASVP GEDIAGALDA 
PSTEDAATDA ALTEPLEASW PTGDVGETGL TDPGTDLQVV DDLVTVAQVS DDVQETWVEE
VAEDYVDTGA SEDEEDPQQQ GDAPARSEEG PDAGQEQPES PEPEAETGSA PEAENTTESA
PEEVEETDPA VSSVESVQVE VLDRSAAEEA GIEGLLLRVT RTDDETGVGP VDLTVDYSDF
ANAYGGDYGG RLDLVEVDTC LLDDSVECQD RAPRTFTTDN DTDAQTLSGT VPALGGEGML
LAAAAEEEGP RGDYQATDLS ATSSWDVGLQ TGSFSWSYPV DTPPVAGDLT PGIELGYSSA
SVDGRVSSSN NQTSWIGEGF DYNPGFIERK YVPCADSQPD SAKTGDLCWS RHNATFSLNG
RSGEMFLDED GTWRMRHDDA SRIERLTGTT NGDNDGEYWR ITTTDGTQYY FGMNRLPGYG
SGDAETNSAW TVPVFGRNSG QPCNGSSFAN SWCQQAWRWN LDYVVDAHGN VMTYQYTKER
NYYGRNGQAN SPTVYDRGGY LRRINYGLRS DDVHATAPAR VNFAVSERCI PTDGFDCAED
KFTSGNARHW PDAPFDRHCA QGQNCTNKLS PTFWTRKKLD SITTQVHDGS AYDNVDSWEL
EHVYPANGDG TPPDLWLQSI THTGHVGDTA SMPTLEFGGT QLENRVDTQD DGFAPMLKWR
ITKILTESGS QTDIRYAGGE CDTGDFPDPH TNGTRCFPVV NSTADGKGEY TDWFHKYVVT
QVSEHDLVTA QPDLITAYEY LGDAAWRYQD ADGFVRDERR TWSDWRGYAH VRVIEGHANA
TRSATEHRFF RGMHGDRLPN GTRTATVTDS AGGEHSDLNQ YNGFTLEEAT LNGPGGDVVE
KTISLPWSRV TGERTYSWGT LESRMTGMAS STQYTAVGDG WMRSRESAEY DSLGRITQTH
DHGDLDDADD DQCTRYTYAD NTGRRILDTV ARTEKVAVGC GTTPAYPDDL ISDERSLFDG
GGFGDAPTVG LETSSQRVME YDGSTPTYQV VQEREHDAYG RTVSETDALG NVTETDYTTT
VPGGAPTTVT TTNPLGHTTT EHFDPARGLP VAEIDANGNR SDMTYDPLGR LTAVWTPDLK
KSDDDPAMRF EYHVRNDAPT VVATHTRNNE GGYSSTYQIY DGLLRERQRQ EPGVGGRRLI
TDTFYDSRGL KVKERHAYTN DEAPAQDIFV PGNKDVPGGN DDLIPRYTQT VYDGAERPTE
VLTMSNGQEL WRTSSEDRGD RQLVTPAPGA IPTTTIKNAR GQTIEVRQHQ GDTPEADYTA
LTYTHTPAGQ VETVTDEAGN VWRNHYDLRG RKVRTDEPDR GTTTFVYDSA DRMVARTDAR
DETVVYAYDE LGRKTEQREG GVNGPLLASW TFDSVAKGEL TRATRHADGL QYSTSIASYD
AMGRPLATTI SIPSAPEYGA LSGSYRFRST YNADGTIETE TLPAAGGLPR EFVRYTYNEL
GLPVSVAGSL EGVETLDYVH ETSYSAHGQI MQRWHHRNDG STQAKSTWSA RTYDPGTQRL
LTARVSHEIG HGTLVDQTYS YDAAGNVLSI RDEPTAQGLL PDVQCFAYDD MRRLTNEWTT
SASGEQACDT TPSREAMGGA APYWNSYTYD DLGNRLTETR HGFVDGSDVE RTYQRPGAGE
ERPHAVTRVD SNGAGGTATY TYDEAGNMAS RQDGNRTQTL EWDAEGQLAA IHEGQNTSEF
VYDAEGERLI RDDGGVVTLF LPGMEIKYDK EDLISQSTRL YEHAGEVVAS RSNDGRVHWI
FSDHHKTGQL AIDSLTGEAI RRRFTAFGGD RGSVGGSWPN SRGFVGGVID EQVGLTRLGA
RSYAPELGSF ISPDPVVDFS DPEQMHGYSY SNNNPVSFTD PDGLFLRKAF AQARRWAVYQ
ARQAAIRAYQ ARLAAIRAYR IRQAAIRAAQ IRAAQIRAAK IRAAQIRAAK IAAAKRAAAA
RAAAARKAAA VKAARERAAR VAAERRRDAA RRKATERDVQ QNERRTSFES VTPAGLPSGA
KDVTDSKGEK ENFRGMTYEE HMESCEETFT GIQTTFAKVV LWRGAAASVV AAGLTGMGAG
VGTAIAAGAG AGGAMFYGGI DNNINRYASS YGEFMGGVNA RILCS