| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_3357 |
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| Symbol | |
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| ID | 9247221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014210 |
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| Strand | + |
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| Start bp | 4011701 |
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| End bp | 4013320 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003681268 |
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| Protein GI | 297562294 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.925027 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAGT GGTGGCGCGA CGCGGTCCTG TACCAGGTCT ACCCGCGCAG CTTCGCCGAC
GCCGACGGGG ACGGGACCGG CGACATCGCG GGGATCACCG CGCGCCTGGG CCACGTCGCC
GACCTGGGCG CGGACGGGAT CTGGCTGTCG CCGTTCTACA CCTCGCCGTG GGCGGACGGC
GGGTACGACG TGGCCGACTT CCGGGACGTG GACCCGCGCC TGGGCACCCT GGAGGACTTC
GACGCGATGG TGGCCGCCGC GCACGCGCTG GGTCTGCGGG TGATGGTCGA CATCGTGCCC
AACCACACCT CCGAGGAGCA CCCGTGGTTC CGGGAGGCGC TGGAGGCCGG CCCCGGGTCG
CCCGAGCGGG AGCTGTACGT CTTCCGCGAC GGGCGGGGCT CGGACGGCGA GCTGCCGCCG
ACCAACTGGC GTTCGACGTT CGGCGGTCCG GCGTGGACCC GCGTGGCGGA CGGGCAGTGG
TACCTGCACA TGTTCGCGCC CGAGCAGCCG GACCTGAACT GGGACGACCC GCGGGTGCGC
GAGGAGTTCC GCGGCATCCT GCGGTTCTGG AGCGGGCGCG GGGTGGACGG GTTCCGGATC
GACGTGGCGT ACGCGCTGGT CAAGGACCTG CGGGAGCCGT TGCGCGACCT GGTGCTGGTG
GAGGGCGGCC GGTTCGAGGA CATCGCGGCC AACCCGGACC ACCCGTTCCT GGACCGGCCC
GAGGTGCACG AGGTGTACCG GGACTGGCGG CGGGTGCTGG CGGAGTTCGA CCCGCCCCGG
GCCACGGTGG GCGAGGTGTG GCTGCCCGGT GAGCGGCGGG TGCTGTACAC GCGCCCGGAC
GAGCTGGACC AGGCGTTCAA CTTCGACTTC CTGAGGACCT CGTGGGACGC CGACGCCTAC
CGCGGCGTGA TCGACTCCTC GATCGCCGAC GCCGGGCAGG TCGGCACGGT GCCCACGTGG
GTGATCGGCA ACCACGACGT GGTGCGGCCG GTGTCGGTGC TGGGGCTGCC CCCGGGCACC
GACCAGAAGG CGTGGCTGCT CTCCGACGGG CGCGACCCGG AGCCGGACCT GGAGCTGGGC
ACGCGGCGGG CACGGGCGCT GGCACTGCTG GAGCTGTCGC TGCCGGGGTC GGCGTACGTG
TACCAGGGCG AGGAGCTGGG GCTGCCGGAG GTGGCGGACC TGCCCGCGCG GGCGCTGGAG
GACCCGCGGT GGGTGCGCAG CGGGCACACC GACAAGGGGC GGGACGGGTG CCGGGTGCCG
CTGCCGTGGA CACGGGAAGG AGCGTCGTAC GGGTTCGGCG GGGACACCCC GTGGCTGCCC
CAGCCCCGAG GGTGGGGCCG GTGGTCGGTG CGGGCCCAGA ACGACGACCC CGGGTCCGTG
CTCTCCCTGT ACCGCCGGGC TCTGGCACAC CGCCGGGAGT TCTCCTCGGA CGAGACTCTG
AGCTGGGACG ACACGCTGAA CCGGGGGCCG GTGCTGGCCT ACTGGCGGGG TGGGGACGTG
CTGGTGCTGG TCAACACGGG CGAGGAGGCG GTGGAGCTGC CGCCGGGCCG GGTGCTGGTG
GCCAGCGCGG AGCTGGACGG GCGGCTCCCG GGAAACGCGG CGGTGTGGCT GCGCCGCTGA
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| Protein sequence | MQQWWRDAVL YQVYPRSFAD ADGDGTGDIA GITARLGHVA DLGADGIWLS PFYTSPWADG
GYDVADFRDV DPRLGTLEDF DAMVAAAHAL GLRVMVDIVP NHTSEEHPWF REALEAGPGS
PERELYVFRD GRGSDGELPP TNWRSTFGGP AWTRVADGQW YLHMFAPEQP DLNWDDPRVR
EEFRGILRFW SGRGVDGFRI DVAYALVKDL REPLRDLVLV EGGRFEDIAA NPDHPFLDRP
EVHEVYRDWR RVLAEFDPPR ATVGEVWLPG ERRVLYTRPD ELDQAFNFDF LRTSWDADAY
RGVIDSSIAD AGQVGTVPTW VIGNHDVVRP VSVLGLPPGT DQKAWLLSDG RDPEPDLELG
TRRARALALL ELSLPGSAYV YQGEELGLPE VADLPARALE DPRWVRSGHT DKGRDGCRVP
LPWTREGASY GFGGDTPWLP QPRGWGRWSV RAQNDDPGSV LSLYRRALAH RREFSSDETL
SWDDTLNRGP VLAYWRGGDV LVLVNTGEEA VELPPGRVLV ASAELDGRLP GNAAVWLRR
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