| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_3333 |
|---|
| Symbol | |
|---|
| ID | 9247195 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 3985382 |
|---|
| End bp | 3986941 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 519 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_003681245 |
|---|
| Protein GI | 297562271 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAACC TGTCCGTGCT CCTGGAGGAC GGTGCCCGGT CGGCTCCGGA GAAGGAGTGC
CTGGTCTTCG GCGACCTGCG CCTGAACTAC GCGATCACCA ACATGATCGC CAACCAGGTG
GCCAACCTGC TGGTCGCGCG CGGGATCAGG CCGGGGGACC GGATCGCGCT GGCCAGTCCG
AACGTGCCCT ACTTCCCCTT CGTGTACTTC GGCGCGCTCA AGGCGGGCGC GGTGATCGTG
CCGCTGAACG TGCTGCTGAC CCCGCGCGAG ATCGCCTACC ACCTGGAGGA CTCCGGGGCC
AGGGCCCTCT TCGCCTTCAC CGGCACGCCG GAGCTCCCCC TGGGCGATCG GGCCTTCGAG
GCCTTCGGCC AGGTGGACTC CTGCGAGTTC TACGTGGACC TGCCCGCCTC CCCGGGTGCC
ACGGAGTCGA CCATCGACGG CGCCGAGACC TTCTGGAAGG CGCTGGAGGG TCAGCCCGGC
GAGTTCGAGA CGGTGCAGGC CAGCTCCGAC GACACCGCGG TCATCATCTA CACCAGCGGC
ACCACCGGCA AGCCCAAGGG CGCCGAGCTG AGCCACCACA ACCTGCTGCT GAACGCGGTC
GGCTCGTCCA GGCTGGTCGA GCCCCACCCC GACGGCCGCG ACGTCGCCCT CGTGGTCCTG
CCGCTGTTCC ACATCTTCGG CCAGACGGTC ATGCTCAACG CGGCCCTGTA CCGGCACGGC
ACGATGGTCC TCATGCCGCG CTTCGACGGC GCCGAGGCGC TCAGGCTCAT GGAGAAGGAG
GGCGTCACCG CCTTCGCGGG CGTGCCCACC ATGTACTGGG GGCTGCTGGG CGCGGTCCGG
GCCGCCGAAC CGGGAACCTA CGACCTGGAG AAGATCGCGG GCAACGTGGT GGACGCGGTC
TCCGGCGGCG CCGCCCTGCC CGGCCAGCTC GCCGAGGACT TCACCAAGAC CTTCGGCGTG
GGCATCAAGG AGGGCTACGG CCTGTCCGAG ACCTCACCGG TGGTGTCGTT CAACAACCCC
AAGGTCAAGG CCAAGACCGG CTCCATCGGG CAGCCGGTGT GGGGTGTGGA GATGAAGCTC
ATCGACCCCG AGTGGAACGA GGCGGCGGAG GAGGGCGAGA TCGCGGTGCG CGGGCACTGC
GTGATGAAGG GGTACCACAA CCGCCCCGAG GTCAACGCGG AGGTGATCCG CGACGGCTGG
TTCCGCACCG GGGACATCGC CCGCCGCGAC GAGGAGGGTT TCTACTTCAT CGTCGACCGG
TCCAAGGACA TGATCATCCG CGGCGGCTAC AACGTCTACC CGCGCGAGGT CGAGGAGGTC
CTGATGACCC ACGAGGCGGT CAGCCTGGCC GCGGTCGTGG GCGTGCCCCA CGACACCCAC
GGCGAGGAGG TCAAGGCGTT CGTGATCCCC AAGGAGGGCG CCGAGGTCAC CGCCGAGGGG
CTCGTCGCGT GGGCCAAGGA GCGCCTGGCC GGGTACAAGT ACCCGCGCGA GGTGGAGTTC
CGCACCGAGC TGCCGATGAC CTCCACCGGC AAGATCCTCA AGCGCGAGCT GCGCGGCTGA
|
|---|
| Protein sequence | MLNLSVLLED GARSAPEKEC LVFGDLRLNY AITNMIANQV ANLLVARGIR PGDRIALASP
NVPYFPFVYF GALKAGAVIV PLNVLLTPRE IAYHLEDSGA RALFAFTGTP ELPLGDRAFE
AFGQVDSCEF YVDLPASPGA TESTIDGAET FWKALEGQPG EFETVQASSD DTAVIIYTSG
TTGKPKGAEL SHHNLLLNAV GSSRLVEPHP DGRDVALVVL PLFHIFGQTV MLNAALYRHG
TMVLMPRFDG AEALRLMEKE GVTAFAGVPT MYWGLLGAVR AAEPGTYDLE KIAGNVVDAV
SGGAALPGQL AEDFTKTFGV GIKEGYGLSE TSPVVSFNNP KVKAKTGSIG QPVWGVEMKL
IDPEWNEAAE EGEIAVRGHC VMKGYHNRPE VNAEVIRDGW FRTGDIARRD EEGFYFIVDR
SKDMIIRGGY NVYPREVEEV LMTHEAVSLA AVVGVPHDTH GEEVKAFVIP KEGAEVTAEG
LVAWAKERLA GYKYPREVEF RTELPMTSTG KILKRELRG
|
|---|
| |