Gene Ndas_3263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3263 
Symbol 
ID9247120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3896536 
End bp3897120 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content77% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003681175 
Protein GI297562201 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.392887 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGGCCA GACCCGCGGG CGAGCGGCGC ACGGCGCTCC TGGGCGCGGC GGCGCGGCTC 
TTCGCCGAGC ACGGTTACCG GGGGGTGTCC ATCGACGACC TCGGCCGCGC CGTCGGCACG
ACAGGGCCCG CCCTGTACCG CCACTTCCGC GGCAAGCAGG CGCTGCTCGG CGCGGTGCTG
GTGGACATCA GCGAACGCCT GGCGCGCCAG GGCGGCGAGC TGGTGGCGAG GGCGTCGGGC
GCCGAGGAGG CGCTGGAGGC CCTGCTGCGC GGGCACATCG CCTTCGCCCT GGACGAGCCC
GACCTGATCA CGGTGCACGA CCGGGAGCTG GGCAACCTCA CCGACGCCGA CCGGCGCCGG
GTGCGCCGCC TCCAGCGCGG CTACGTCGAG CAGTGGGTGG GGGTGCTCGG CGAGCTGCGC
CCCGACGCCT CGGCCACCGT CCTGCGCGCC GCCGTGCACG CCGTGTTCGG GCTCCTCAAC
TCCACCCCGC ACAGCCGGGG CGAGCTGTCG CGGCGGCACA TGGCGCGGCT GCTGCTGGAG
ATGGGCCGGG CCGCCCTGAC GGTCCCCGCC GCCGAGCCCG ACTGA
 
Protein sequence
MGARPAGERR TALLGAAARL FAEHGYRGVS IDDLGRAVGT TGPALYRHFR GKQALLGAVL 
VDISERLARQ GGELVARASG AEEALEALLR GHIAFALDEP DLITVHDREL GNLTDADRRR
VRRLQRGYVE QWVGVLGELR PDASATVLRA AVHAVFGLLN STPHSRGELS RRHMARLLLE
MGRAALTVPA AEPD