Gene Ndas_3178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3178 
Symbol 
ID9247035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3803492 
End bp3803887 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content71% 
IMG OID 
ProductInterferon-induced transmembrane protein 
Protein accessionYP_003681092 
Protein GI297562118 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.132387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTACG GTCCCCCTCC CCCCGGCAAC CCCGGCCCGC CCCCCGGCGG CGGCTACGGT 
CCCCCCGGGG GCGGCGGCTA CGGCCCGCCC TCCGGCGGCT ACGGCGCCCC CAGCGGTCCT
CCGCCGGACA ACGGCCTGGT CTGGGCCATC GTCGCCATCT TCTGCTGCTG GCCCTTCGCC
ATCCCGGCCA TCATCAACGC GACCAAGGTC AACGACCTGT GGAACCGCGG CGACCAGGCC
GGCGCTCTGG AGGCCCAGAA GCAGTCCAAG AAGTGGACGA AGATCGCCTT CATCCTCGGC
GGCATCTGGG TCGCCCTGTG GGTCATCTAC ATGATCTTCG TGGTCGTCCT GGGCATCGGC
GCCGCCGCCA CCGCCCCGAC CTACACGACG TACTGA
 
Protein sequence
MSYGPPPPGN PGPPPGGGYG PPGGGGYGPP SGGYGAPSGP PPDNGLVWAI VAIFCCWPFA 
IPAIINATKV NDLWNRGDQA GALEAQKQSK KWTKIAFILG GIWVALWVIY MIFVVVLGIG
AAATAPTYTT Y