Gene Ndas_3116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3116 
Symbol 
ID9246972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand+ 
Start bp3730521 
End bp3731702 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content77% 
IMG OID 
Productglycine oxidase ThiO 
Protein accessionYP_003681031 
Protein GI297562057 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.248059 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAGCCA CAGCCGTGCG CACCTCCAAC GATCCCCACC GCGACCGCGT CGTCGTGGTC 
GGCGGCGGCC TGGTCGGCCG GGTCACCGCC TGGCGCGCCG CCCAACGCGG ACTGAGCGTC 
ACCCTGGTCG AGTCCGACCC CGCCCGCGCC GCCTCCACCG TGGCCGCGGG CATGCTGACC 
CCCGCCACCG AGGCCGCGTT CGGCGAGGAG CCCCTCATGG AGCTGGGCAT CCGCTCGGCC 
CGCATGTACG CGGACTTCGT CGCCGAACTG GAGGAGGCCA GCGGCCTGGA CGTGGGACAC 
CGCGCCACCG GCACGCTGCT GGTCGCCTTC GACCGCGACG ACCTGGCCGT CCTCACCGAA 
CTGCACGCGC TCCAGCGGAG GCTGGGCATC GCCGCCGAGC GCCTCACCGG ACGCGAGTGC 
CGCCGTCTGG AGCCCATGCT CGCCCCGTCC GTGCGCGGCG GCGTCCTGGC CCCCGACGAC 
CACTCCGTGG ATCCGCGGCG GCTGCTGCGC GCCCTGACCG CCGCGGGCGC ACGCGCGGGC 
GTCACCGAGG TCCGCGGGCG GGTCGGGGAG GTCCTCTCCC CCGGCCCCGG GGGCTCCCGG 
CTGGGCGTGC GCCTGGCCGG GGAGGCCGAG GCGGGGCGGA CCCTGCCCGC GCACCAGGTG 
GTGCTGGCCG CGGGCTGCTG GGGCAACGGC GTCGTGGTCC CCGAACCCGT CGTCCCGCCG 
CTGCGCCCGG TCAAGGGACA GCTGCTGCGC GCCCGGGTGC CCGAGGGCGA GCCGCCGCTC 
GTCAGCCGGA CCGTCCGCGG CCTGGTCCGG GGCTTCCCGA CCTACCTGGT GCCGCGCGCC 
GACGGCGAGG TCGTCATCGG CGCCACCCAG GAGGAGCTGG GCTACGACAC CTCGCTCACC 
GTCGGGGGGC TCTGGCAGGT GCTGCGGGAC GCGCTCGAAC TCGTCCCCGG GGTGAGCGAG 
CTGGAGGTCA CCGAGACCTG CGTCGGGCTG CGCCCCGGCT CGCCCGACAA CGAGCCCCTC 
CTGGGGCCCA CACGGGTCCC GGGACTGCAC CTGGCCGCCG GGCACTTCCG GCACGGGGTC 
CTGCTGACCC CGGTGACCGG GGAGGCCATG GCCCGGGCCC TGACCGACGG AGACCTGCCC 
GAGTACGCCC GCCGTTTCAC GGCACGACGC GCAAGTAGGT AG
 
Protein sequence
MEATAVRTSN DPHRDRVVVV GGGLVGRVTA WRAAQRGLSV TLVESDPARA ASTVAAGMLT 
PATEAAFGEE PLMELGIRSA RMYADFVAEL EEASGLDVGH RATGTLLVAF DRDDLAVLTE 
LHALQRRLGI AAERLTGREC RRLEPMLAPS VRGGVLAPDD HSVDPRRLLR ALTAAGARAG 
VTEVRGRVGE VLSPGPGGSR LGVRLAGEAE AGRTLPAHQV VLAAGCWGNG VVVPEPVVPP 
LRPVKGQLLR ARVPEGEPPL VSRTVRGLVR GFPTYLVPRA DGEVVIGATQ EELGYDTSLT 
VGGLWQVLRD ALELVPGVSE LEVTETCVGL RPGSPDNEPL LGPTRVPGLH LAAGHFRHGV 
LLTPVTGEAM ARALTDGDLP EYARRFTARR ASR