Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_3114 |
Symbol | |
ID | 9246970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 3729238 |
End bp | 3729918 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | thiamine-phosphate pyrophosphorylase |
Protein accession | YP_003681029 |
Protein GI | 297562055 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.33559 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACCGTG TGAGGACCAG CCACGGAACC AGCCTGCGCA AGCGCCTGGA CGCATCGCTT CTGTACCTGT GCACCGACGC CCGGACCGGT CGGGGCGACC TGGCCGAGTT CGCCGACGCG GCCCTGGCCG GGGGAGTGGA CATCATCCAG CTCCGGGACA AGGGCCTGGA GGCACGCGAG GAGATCGCGG CCCTGGAGGT GATGAAGGAG GCGTGCGAGC GGTACGGCGC CCTGCTCGCG GTCAACGACC GCGCCGACAT CGCCCGCGCC GTGCGCGCCG ACGTCCTCCA CCTGGGTCAG CGGGACCTGC CCGTGCCCAT GGCCCGCGAC ATCATCGGCG CCGACCCCGT GATCGGCCGC TCCAACAACG ACGTCGCCGC CGCGGCCGCC TCCGCCGAGG AGCCGGGCAG CGACTACTTC TGCGTCGGAC CGACCTGGGC GACGCCCACC AAGCCGGGCC GCCCGGCCGC CGGGCTGGAG CTGGTGGAGG AGGCGGCCGC GCTGGGCACC GACCGCCCCT GGTTCGCCAT CGGCGGGATC GACGTCGACA ACATCGACCG CGTGCTGGAC GCCGGGGCCC GCCGGGTCGT GGTCGTGCGC GCGATCACGG AAGCGGAGGA CCCCCGGGCC GCCGCCGCCG CTCTGCGCCA GCGCCTGGCG GCCCGCGCCG CCCGGCCCTA G
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Protein sequence | MDRVRTSHGT SLRKRLDASL LYLCTDARTG RGDLAEFADA ALAGGVDIIQ LRDKGLEARE EIAALEVMKE ACERYGALLA VNDRADIARA VRADVLHLGQ RDLPVPMARD IIGADPVIGR SNNDVAAAAA SAEEPGSDYF CVGPTWATPT KPGRPAAGLE LVEEAAALGT DRPWFAIGGI DVDNIDRVLD AGARRVVVVR AITEAEDPRA AAAALRQRLA ARAARP
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